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Biofilm Formation and Quantification Using the 96-Microtiter Plate

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Leptospira spp.

Part of the book series: Methods in Molecular Biology ((MIMB,volume 2134))

Abstract

Biofilm formation in microtiter plates is certainly the most commonly used method to grow and study biofilm. This simple design is very popular due to its high-throughput screening capacities, low cost, and easy handling. In the protocol described here, we focus on the use of 96-well optically clear, polystyrene flat-bottom plate to study biofilm formation by Leptospira spp. and quantify the biofilm formation by crystal violet (CV) staining. We also describe an alternative method, based on phase contrast image analysis that we believe is more suitable for accurately quantifying biofilm growth by reducing handling of this fragile structure.

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References

  1. Flemming H-C, Wingender J (2010) The biofilm matrix. Nat Rev Microbiol 8(9):623

    Article  CAS  Google Scholar 

  2. Costerton JW, Stewart PS, Greenberg EP (1999) Bacterial biofilms: a common cause of persistent infections. Science 284(5418):1318–1322

    Article  CAS  Google Scholar 

  3. Coenye T, Nelis HJ (2010) In vitro and in vivo model systems to study microbial biofilm formation. J Microbiol Methods 83(2):89–105. https://doi.org/10.1016/j.mimet.2010.08.018

    Article  CAS  PubMed  Google Scholar 

  4. Fletcher M (1977) The effects of culture concentration and age, time, and temperature on bacterial attachment to polystyrene. Can J Microbiol 23(1):1–6

    Article  Google Scholar 

  5. O'toole GA, Kolter R (1998) Flagellar and twitching motility are necessary for Pseudomonas aeruginosa biofilm development. Mol Microbiol 30(2):295–304

    Article  CAS  Google Scholar 

  6. Djordjevic D, Wiedmann M, McLandsborough L (2002) Microtiter plate assay for assessment of Listeria monocytogenes biofilm formation. Appl Environ Microbiol 68(6):2950–2958

    Article  CAS  Google Scholar 

  7. Christensen GD, Simpson WA, Younger J, Baddour L, Barrett F, Melton D, Beachey E (1985) Adherence of coagulase-negative staphylococci to plastic tissue culture plates: a quantitative model for the adherence of staphylococci to medical devices. J Clin Microbiol 22(6):996–1006

    Article  CAS  Google Scholar 

  8. Yang Y, Jung DW, Bai DG, Yoo GS, Choi JK (2001) Counterion-dye staining method for DNA in agarose gels using crystal violet and methyl orange. Electrophoresis 22(5):855–859. https://doi.org/10.1002/1522-2683()22:5<855::aid-elps855>3.0.co;2-y

    Article  CAS  PubMed  Google Scholar 

  9. Bonnekoh B, Wevers A, Jugert F, Merk H, Mahrle G (1989) Colorimetric growth assay for epidermal cell cultures by their crystal violet binding capacity. Arch Dermatol Res 281(7):487–490

    Article  CAS  Google Scholar 

  10. Colvin KM, Gordon VD, Murakami K, Borlee BR, Wozniak DJ, Wong GC, Parsek MR (2011) The pel polysaccharide can serve a structural and protective role in the biofilm matrix of Pseudomonas aeruginosa. PLoS Pathog 7(1):e1001264. https://doi.org/10.1371/journal.ppat.1001264

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  11. Ristow P, Bourhy P, Kerneis S, Schmitt C, Prevost MC, Lilenbaum W, Picardeau M (2008) Biofilm formation by saprophytic and pathogenic leptospires. Microbiology 154(Pt 5):1309–1317

    Article  CAS  Google Scholar 

  12. Ellinghausen HC Jr, McCullough WG (1965) Nutrition of Leptospira Pomona and growth of 13 other serotypes: fractionation of oleic albumin complex and a medium of bovine albumin and polysorbate 80. Am J Vet Res 26:45–51

    CAS  PubMed  Google Scholar 

  13. Johnson RC, Harris VG (1967) Differentiation of pathogenic and saprophytic leptospires. I. Growth at low temperatures. J Bacteriol 94(1):27–31

    Article  CAS  Google Scholar 

  14. Schindelin J, Arganda-Carreras I, Frise E, Kaynig V, Longair M, Pietzsch T, Preibisch S, Rueden C, Saalfeld S, Schmid B, Tinevez JY, White DJ, Hartenstein V, Eliceiri K, Tomancak P, Cardona A (2012) Fiji: an open-source platform for biological-image analysis. Nat Methods 9(7):676–682. https://doi.org/10.1038/nmeth.2019

    Article  CAS  Google Scholar 

  15. Merritt JH, Kadouri DE, O'Toole GA (2005) Growing and analyzing static biofilms. Curr Protoc Microbiol . Chapter 1:Unit 1B 1. https://doi.org/10.1002/9780471729259.mc01b01s00

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Acknowledgments

This work was supported by an AXA Research Funds grant “AXA Postdoctoral Fellowship,” 15-AXA-PDOC-037 granted to RT.

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Correspondence to Roman Thibeaux .

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Thibeaux, R., Kainiu, M., Goarant, C. (2020). Biofilm Formation and Quantification Using the 96-Microtiter Plate. In: Koizumi, N., Picardeau, M. (eds) Leptospira spp.. Methods in Molecular Biology, vol 2134. Humana, New York, NY. https://doi.org/10.1007/978-1-0716-0459-5_19

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  • DOI: https://doi.org/10.1007/978-1-0716-0459-5_19

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  • Publisher Name: Humana, New York, NY

  • Print ISBN: 978-1-0716-0458-8

  • Online ISBN: 978-1-0716-0459-5

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