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Assessment of NLRP3 Inflammasome Activation and NLRP3-NEK7 Complex Assembly

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Pyroptosis

Part of the book series: Methods in Molecular Biology ((MIMB,volume 2641))

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Abstract

The NLRP3 inflammasome is a critical component of innate immunity that activates caspase-1 to induce inflammation in response to a wide spectrum of endogenous and exogenous stimuli. NLRP3 inflammasome activation has been shown by assays for the cleavage of caspase-1 and gasdermin D, the maturation of IL-1β and IL-18, and ASC speck formation in innate immune cells such as macrophages and monocytes. Recently, NEK7 has been revealed as an essential regulator for NLRP3 inflammasome activation by forming high-molecular-weight complexes with NLRP3. Blue native polyacrylamide gel electrophoresis (BN-PAGE) has been used to study multi-protein complexes in many experimental systems. Here, we provide a detailed protocol to detect NLRP3 inflammasome activation and NLRP3-NEK7 complex assembly in mouse macrophages by Western blot and BN-PAGE.

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References

  1. Schroder K, Tschopp J (2010) The Inflammasomes. Cell 140(6):821–832. https://doi.org/10.1016/j.cell.2010.01.040

    Article  CAS  PubMed  Google Scholar 

  2. Broz P, Dixit VM (2016) Inflammasomes: mechanism of assembly, regulation and signalling. Nat Rev Immunol 16(7):407–420. https://doi.org/10.1038/nri.2016.58

    Article  CAS  PubMed  Google Scholar 

  3. Jin T, Xiao TS (2015) Activation and assembly of the inflammasomes through conserved protein domain families. Apoptosis 20(2):151–156. https://doi.org/10.1007/s10495-014-1053-5

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  4. Srinivasula SM, Poyet JL, Razmara M, Datta P, Zhang ZJ, Alnemri ES (2002) The PYRIN-CARD protein ASC is an activating adaptor for caspase-1. J Biol Chem 277(24):21119–21122. https://doi.org/10.1074/jbc.C200179200

    Article  CAS  PubMed  Google Scholar 

  5. Shi J, Zhao Y, Wang K, Shi X, Wang Y, Huang H, Zhuang Y, Cai T, Wang F, Shao F (2015) Cleavage of GSDMD by inflammatory caspases determines pyroptotic cell death. Nature 526(7575):660–665. https://doi.org/10.1038/nature15514

    Article  CAS  PubMed  Google Scholar 

  6. Kayagaki N, Stowe IB, Lee BL, O’Rourke K, Anderson K, Warming S, Cuellar T, Haley B, Roose-Girma M, Phung QT, Liu PS, Lill JR, Li H, Wu J, Kummerfeld S, Zhang J, Lee WP, Snipas SJ, Salvesen GS, Morris LX, Fitzgerald L, Zhang Y, Bertram EM, Goodnow CC, Dixit VM (2015) Caspase-11 cleaves gasdermin D for non-canonical inflammasome signalling. Nature 526(7575):666–671. https://doi.org/10.1038/nature15541

    Article  CAS  PubMed  Google Scholar 

  7. Swanson KV, Deng M, Ting JP (2019) The NLRP3 inflammasome: molecular activation and regulation to therapeutics. Nat Rev Immunol 19(8):477–489. https://doi.org/10.1038/s41577-019-0165-0

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  8. Sutterwala FS, Haasken S, Cassel SL (2014) Mechanism of NLRP3 inflammasome activation. Ann NY Acad Sci 1319:82–95. https://doi.org/10.1111/nyas.12458

    Article  CAS  PubMed  Google Scholar 

  9. Kelley N, Jeltema D, Duan Y, He Y (2019) The NLRP3 Inflammasome: an overview of mechanisms of activation and regulation. Int J Mol Sci 20(13). https://doi.org/10.3390/ijms20133328

  10. He Y, Zeng MY, Yang D, Motro B, Nunez G (2016) NEK7 is an essential mediator of NLRP3 activation downstream of potassium efflux. Nature 530(7590):354–357. https://doi.org/10.1038/nature16959

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  11. Shi H, Wang Y, Li X, Zhan X, Tang M, Fina M, Su L, Pratt D, Bu CH, Hildebrand S, Lyon S, Scott L, Quan J, Sun Q, Russell J, Arnett S, Jurek P, Chen D, Kravchenko VV, Mathison JC, Moresco EM, Monson NL, Ulevitch RJ, Beutler B (2016) NLRP3 activation and mitosis are mutually exclusive events coordinated by NEK7, a new inflammasome component. Nat Immunol 17(3):250–258. https://doi.org/10.1038/ni.3333

    Article  CAS  PubMed  Google Scholar 

  12. Schmid-Burgk JL, Chauhan D, Schmidt T, Ebert TS, Reinhardt J, Endl E, Hornung V (2015) A genome-wide CRISPR screen identifies NEK7 as an essential component of NLRP3 inflammasome activation. J Biol Chem. https://doi.org/10.1074/jbc.C115.700492

  13. Swamy M, Kulathu Y, Ernst S, Reth M, Schamel WW (2006) Two dimensional blue native-/SDS-PAGE analysis of SLP family adaptor protein complexes. Immunol Lett 104(1-2):131–137. https://doi.org/10.1016/j.imlet.2005.11.004

    Article  CAS  PubMed  Google Scholar 

  14. Strecker V, Wumaier Z, Wittig I, Schagger H (2010) Large pore gels to separate mega protein complexes larger than 10 MDa by blue native electrophoresis: isolation of putative respiratory strings or patches. Proteomics 10(18):3379–3387. https://doi.org/10.1002/pmic.201000343

    Article  CAS  PubMed  Google Scholar 

  15. Wittig I, Braun HP, Schagger H (2006) Blue native PAGE. Nat Protoc 1(1):418–428. https://doi.org/10.1038/nprot.2006.62

    Article  CAS  PubMed  Google Scholar 

  16. Kofoed EM, Vance RE (2011) Innate immune recognition of bacterial ligands by NAIPs determines inflammasome specificity. Nature 477(7366):592–595. https://doi.org/10.1038/nature10394

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  17. Duan Y, Zhang L, Angosto-Bazarra D, Pelegrin P, Nunez G, He Y (2020) RACK1 mediates NLRP3 Inflammasome activation by promoting NLRP3 active conformation and Inflammasome assembly. Cell Rep 33(7):108405. https://doi.org/10.1016/j.celrep.2020.108405

    Article  CAS  PubMed  PubMed Central  Google Scholar 

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Acknowledgments

This work was supported by NIH grant AI148544 and Wayne State Startup funds to Y. H.

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Correspondence to Yuan He .

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© 2023 The Author(s), under exclusive license to Springer Science+Business Media, LLC, part of Springer Nature

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Kelley, N., He, Y. (2023). Assessment of NLRP3 Inflammasome Activation and NLRP3-NEK7 Complex Assembly. In: Fink, S.L. (eds) Pyroptosis. Methods in Molecular Biology, vol 2641. Humana, New York, NY. https://doi.org/10.1007/978-1-0716-3040-2_2

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  • DOI: https://doi.org/10.1007/978-1-0716-3040-2_2

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  • Publisher Name: Humana, New York, NY

  • Print ISBN: 978-1-0716-3039-6

  • Online ISBN: 978-1-0716-3040-2

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