Skip to main content

Silver Filler Pre-embedding to Enhance Resolution and Contrast in Multidimensional SEM: A Nanoscale Imaging Study on Liver Tissue

  • Protocol
  • First Online:

Part of the book series: Methods in Molecular Biology ((MIMB,volume 1814))

Abstract

Contemporarily, serial block-face scanning electron microscopy (SBF-SEM) has emerged as an immensely powerful nanoscopic imaging technique, capable of generating large-volume three-dimensional information on a variety of biological specimens in a semiautomated manner. Despite the plethora of insights and advantages provided by SBF-SEM, a major challenge inherent to the technique is that of electron charging, which ultimately reduces attainable resolution and detracts from overall image quality. In this chapter, we describe a pre-embedding approach that involves infiltration of tissue with a highly conductive silver filler suspension following primary fixation. Such an approach is demonstrated to improve overall sample conductivity, resulting in the minimization of charging under high-vacuum conditions and an improvement in lateral resolution and image contrast. The strength of this sample preparation approach for SBF-SEM is illustrated on liver tissue.

This is a preview of subscription content, log in via an institution.

Buying options

Protocol
USD   49.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD   139.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD   179.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD   249.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Learn about institutional subscriptions

Springer Nature is developing a new tool to find and evaluate Protocols. Learn more

References

  1. Denk W, Horstmann H (2004) Serial block-face scanning electron microscopy to reconstruct three-dimensional tissue nanostructure. PLoS Biol 2(11):e329. https://doi.org/10.1371/journal.pbio.0020329

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  2. Leighton SB (1981) SEM images of block faces, cut by a miniature microtome within the SEM – a technical note. Scan Electron Microsc Pt 2:73–76

    Google Scholar 

  3. Titze B, Genoud C (2016) Volume scanning electron microscopy for imaging biological ultrastructure. Biol Cell 108:307. https://doi.org/10.1111/boc.201600024

    Article  PubMed  CAS  Google Scholar 

  4. Deerinck TJ, Bushong EA, Thor A, Ellisman MH (2010) NCMIR methods for 3D EM: a new protocol for preparation of biological specimens for serial block face scanning electron microscopy. National Center for Microscopy and Imaging Research. https://www.ncmir.ucsd.edu/sbem-protocol/

  5. Hua Y, Laserstein P, Helmstaedter M (2015) Large-volume en-bloc staining for electron microscopy-based connectomics. Nat Commun 6:7923. https://doi.org/10.1038/ncomms8923

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  6. Griffin BJ (2007) Variable pressure and environmental scanning electron microscopy: imaging of biological samples. Methods Mol Biol 369:467–495. https://doi.org/10.1007/978-1-59745-294-6_23

    Article  PubMed  CAS  Google Scholar 

  7. Stokes D, Royal Microscopical S (2008) Principles and practice of variable pressure/environmental scanning electron microscopy (VP-ESEM). Book, Whole. Wiley, Chichester, UK

    Book  Google Scholar 

  8. Shami GJ, Cheng D, Huynh M et al (2016) 3-D EM exploration of the hepatic microarchitecture – lessons learned from large-volume in situ serial sectioning. Sci Rep 6:36744

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  9. Wisse E, Braet F, Duimel H et al (2010) Fixation methods for electron microscopy of human and other liver. World J Gastroenterol 16(23):2851–2866. https://doi.org/10.3748/wjg.v16.i23.2851

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  10. Shami GJ, Cheng D, Braet F (2017) Silver filler pre-embedding for multidimensional nanoscopic imaging. https://vimeo.com/235291098

  11. Schindelin J, Arganda-Carreras I, Frise E et al (2012) Fiji: an open-source platform for biological-image analysis. Nat Methods 9(7):676–682. https://doi.org/10.1038/nmeth.2019

    Article  PubMed  CAS  Google Scholar 

  12. Kremer JR, Mastronarde DN, McIntosh JR (1996) Computer visualization of three-dimensional image data using IMOD. J Struct Biol 116(1):71–76. https://doi.org/10.1006/jsbi.1996.0013

    Article  PubMed  CAS  Google Scholar 

Download references

Acknowledgments

The authors acknowledge the facilities as well as the technical assistance from staff of the AMMRF node at the University of Sydney. We are also grateful to Dr. Laura A. Lindsay and Professor Christopher R. Murphy from the Cell and Reproductive Biology Laboratory, the University of Sydney, for their kind provision of tissue samples.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Gerald J. Shami .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2018 Springer Science+Business Media, LLC, part of Springer Nature

About this protocol

Check for updates. Verify currency and authenticity via CrossMark

Cite this protocol

Shami, G.J., Cheng, D., Braet, F. (2018). Silver Filler Pre-embedding to Enhance Resolution and Contrast in Multidimensional SEM: A Nanoscale Imaging Study on Liver Tissue. In: Lyubchenko, Y. (eds) Nanoscale Imaging. Methods in Molecular Biology, vol 1814. Humana Press, New York, NY. https://doi.org/10.1007/978-1-4939-8591-3_33

Download citation

  • DOI: https://doi.org/10.1007/978-1-4939-8591-3_33

  • Published:

  • Publisher Name: Humana Press, New York, NY

  • Print ISBN: 978-1-4939-8590-6

  • Online ISBN: 978-1-4939-8591-3

  • eBook Packages: Springer Protocols

Publish with us

Policies and ethics