Abstract
The antimicrobial lipopeptides polymyxin B and colistin (polymyxin E) are used as a ‘last-line’ therapy for infections caused by multidrug-resistant (MDR) Gram-negative pathogens. However, their effective use as antibiotic drugs in the clinical setting is still plagued by significant toxicity issues, in particular their potential for nephrotoxicity. Furthermore, resistance to the polymyxins has begun to emerge in the clinic, which implies a total lack of antibiotics for the treatment of life-threatening infections caused by the Gram-negative ‘superbugs’. This chapter details our current understanding of polymyxin structure-activity relationships as well as recent pre-clinical and clinical drug development efforts aimed at generating new polymyxin antibiotics with improved safety and efficacy.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
References
Velkov T, Roberts KD, Nation RL, Thompson PE, Li J (2013) Pharmacology of polymyxins: new insights into an ‘old’ class of antibiotics. Future Microbiol 8(6):711–724
Velkov T, Thompson PE, Nation RL, Li J (2010) Structure-activity relationships of polymyxin antibiotics. J Med Chem 53(5):1898–1916
Mares J, Kumaran S, Gobbo M, Zerbe O (2009) Interactions of lipopolysaccharide and polymyxin studied by NMR spectroscopy. J Biol Chem 284(17):11498–11506
Pristovsek P, Kidric J (1999) Solution structure of polymyxins B and E and effect of binding to lipopolysaccharide: an NMR and molecular modeling study. J Med Chem 42(22):4604–4613
de Visser PC, Kriek NM, van Hooft PA, Van Schepdael A, Filippov DV, van der Marel GA et al (2003) Solid-phase synthesis of polymyxin B1 and analogues via a safety-catch approach. J Pept Res 61(6):298–306
Okimura K, Ohki K, Sato Y, Ohnishi K, Sakura N (2007) Semi-synthesis of polymyxin B (2-10) and colistin (2-10) analogs employing the trichloroethoxycarbonyl (Troc) group for side chain protection of alpha,gamma-diaminobutyric acid residues. Chem Pharm Bull (Tokyo) 55(12):1724–1730
Sakura N, Itoh T, Uchida Y, Ohki K, Okimura K, Chiba K et al (2004) The contribution of the N-terminal structure of polymyxin B peptides to antimicrobial and lipopolysaccharide binding activity. Bull Chem Soc Jpn 77(10):1915–1924
Chihara S, Ito A, Yahata M, Tobita T, Koyama Y (1974) Chemical synthesis, isolation and characterization of α-N-fattyacyl colistin nonapeptide with special reference to the correlation between antimicrobial activity and carbon number of fattyacyl moiety. Agric Biol Chem 38(3):521–529
Tsubery H, Ofek I, Cohen S, Fridkin M (2001) N-terminal modifications of polymyxin B nonapeptide and their effect on antibacterial activity. Peptides 22(10):1675–1681
Vaara M (1991) The outer membrane permeability-increasing action of linear analogues of polymyxin B nonapeptide. Drugs Exp Clin Res 17(9):437–443
Okimura K, Ohki K, Sato Y, Ohnishi K, Uchida Y, Sakura N (2007) Chemical conversion of natural polymyxin B and colistin to their N-terminal derivatives. Bull Chem Soc Jpn 80(3):543–552
Katsuma N, Sato Y, Ohki K, Okimura K, Ohnishi K, Sakura N (2009) Development of des-fatty acyl-polymyxin B decapeptide analogs with pseudomonas aeruginosa-specific antimicrobial activity. Chem Pharm Bull (Tokyo) 57(4):332–336
Barnett M, Bushby SR, Wilkinson S (1964) Sodium sulphomethyl derivatives of polymyxins. Br J Pharmacol Chemother 23:552–574
Vaara M, Fox J, Loidl G, Siikanen O, Apajalahti J, Hansen F et al (2008) Novel polymyxin derivatives carrying only three positive charges are effective antibacterial agents. Antimicrob Agents Chemother 52(9):3229–3236
Kimura Y, Matsunaga H, Vaara M (1992) Polymyxin B octapeptide and polymyxin B heptapeptide are potent outer membrane permeability-increasing agents. J Antibiot (Tokyo) 45(5):742–749
Kanazawa K, Sato Y, Ohki K, Okimura K, Uchida Y, Shindo M et al (2009) Contribution of each amino acid residue in polymyxin B(3) to antimicrobial and lipopolysaccharide binding activity. Chem Pharm Bull (Tokyo) 57(3):240–244
Tsubery H, Ofek I, Cohen S, Fridkin M (2000) Structure activity relationship study of polymyxin B nonapeptide. Adv Exp Med Biol 479:219–222
Rabanal F, Cajal Y (2017) Recent advances and perspectives in the design and development of polymyxins. Nat Prod Rep 34(7):886–908
Brown P, Dawson MJ (2017) Development of new polymyxin derivatives for multi-drug resistant Gram-negative infections. J Antibiot (Tokyo) 70(4):386–394
Velkov T, Roberts KD, Nation RL, Wang J, Thompson PE, Li J (2014) Teaching ‘old’ polymyxins new tricks: new-generation lipopeptides targeting Gram-negative ‘superbugs’. ACS Chem Biol 9(5):1172–1177
Clements A, Tull D, Jenney AW, Farn JL, Kim SH, Bishop RE et al (2007) Secondary acylation of klebsiella pneumoniae lipopolysaccharide contributes to sensitivity to antibacterial peptides. J Biol Chem 282(21):15569–15577
Moskowitz SM, Ernst RK (2010) The role of pseudomonas lipopolysaccharide in cystic fibrosis airway infection. Subcell Biochem 53:241–253
Moskowitz SM, Ernst RK, Miller SI (2004) PmrAB, a two-component regulatory system of Pseudomonas aeruginosa that modulates resistance to cationic antimicrobial peptides and addition of aminoarabinose to lipid A. J Bacteriol 186(2):575–579
Hancock RE (1997) Peptide antibiotics. Lancet 349(9049):418–422
Li J, Nation RL, Milne RW, Turnidge JD, Coulthard K (2005) Evaluation of colistin as an agent against multi-resistant Gram-negative bacteria. Int J Antimicrob Agents 25(1):11–25
Koike M, Iida K, Matsuo T (1969) Electron microscopic studies on mode of action of polymyxin. J Bacteriol 97(1):448–452
Soon RL, Velkov T, Chiu F, Thompson PE, Kancharla R, Roberts K et al (2011) Design, synthesis, and evaluation of a new fluorescent probe for measuring polymyxin-lipopolysaccharide binding interactions. Anal Biochem 409(2):273–283
Li J, Milne RW, Nation RL, Turnidge JD, Smeaton TC, Coulthard K (2003) Use of high-performance liquid chromatography to study the pharmacokinetics of colistin sulfate in rats following intravenous administration. Antimicrob Agents Chemother 47(5):1766–1770
Yousef JM, Chen G, Hill PA, Nation RL, Li J (2012) Ascorbic acid protects against the nephrotoxicity and apoptosis caused by colistin and affects its pharmacokinetics. J Antimicrob Chemother 67(2):452–459
Ali FE, Cao G, Poudyal A, Vaara T, Nation RL, Vaara M et al (2009) Pharmacokinetics of novel antimicrobial cationic peptides NAB 7061 and NAB 739 in rats following intravenous administration. J Antimicrob Chemother 64(5):1067–1070
Vaara M (2013) Novel derivatives of polymyxins. J Antimicrob Chemother 68(6):1213–1219
Vaara M, Sader HS, Rhomberg PR, Jones RN, Vaara T (2013) Antimicrobial activity of the novel polymyxin derivative NAB739 tested against Gram-negative pathogens. J Antimicrob Chemother 68(3):636–639
Vaara M, Siikanen O, Apajalahti J, Fox J, Frimodt-Moller N, He H et al (2010) A novel polymyxin derivative that lacks the fatty acid tail and carries only three positive charges has strong synergism with agents excluded by the intact outer membrane. Antimicrob Agents Chemother 54(8):3341–3346
Vaara M, Siikanen O, Apajalahti J, Frimodt-Moller N, Vaara T (2010) Susceptibility of carbapenemase-producing strains of Klebsiella pneumoniae and Escherichia coli to the direct antibacterial activity of NAB739 and to the synergistic activity of NAB7061 with rifampicin and clarithromycin. J Antimicrob Chemother 65(5):942–945
Vaara M, Vaara T (2010) Structure-activity studies on novel polymyxin derivatives that carry only three positive charges. Peptides 31(12):2318–2321
Vaara M, Vaara T (2013) The novel polymyxin derivative NAB739 is remarkably less cytotoxic than polymyxin B and colistin to human kidney proximal tubular cells. Int J Antimicrob Agents 41(3):292–293
Vingsbo Lundberg C, Vaara T, Frimodt-Moller N, Vaara M (2010) Novel polymyxin derivatives are effective in treating experimental Escherichia coli peritoneal infection in mice. J Antimicrob Chemother 65(5):981–985
Nielsen R, Birn H, Moestrup SK, Nielsen M, Verroust P, Christensen EI (1998) Characterization of a kidney proximal tubule cell line, LLC-PK1, expressing endocytotic active megalin. J Am Soc Nephrol 9(10):1767–1776
Vaara M, Vaara T, Vingsbo LC (2017) Polymyxin derivatives NAB739 and NAB815 are more effective than polymyxin B in murine Escherichia coli pyelonephritis. J Antimicrob Chemother 73(2):452–455
Vaara M, Vaara T, Tyrrell JM (2017) Structure-activity studies on polymyxin derivatives carrying three positive charges only reveal a new class of compounds with strong antibacterial activity. Peptides 91:8–12
Spero completes $30 million financing [press release]. June 8, 2015
Corbett D, Wise A, Langley T, Skinner K, Trimby E, Birchall S et al (2017) Potentiation of antibiotic activity by a novel cationic peptide: potency and spectrum of activity of SPR741. Antimicrob Agents Chemother 61(8):e00200-17
Zabawa TP, Pucci MJ, Parr TR Jr, Lister T (2016) Treatment of Gram-negative bacterial infections by potentiation of antibiotics. Curr Opin Microbiol 33:7–12
Spero therapeutics announces positive phase 1 clinical data from potentiator platform [press release]. October 3rd, 2017
Spero therapeutics announces positive top-line data for two product candidates from its potentiator platform [press release]. May 23rd, 2018
Vaara M, Vaara T (1983) Polycations sensitize enteric bacteria to antibiotics. Antimicrob Agents Chemother 24(1):107–113
Vaara M, Vaara T (1983) Polycations as outer membrane-disorganizing agents. Antimicrob Agents Chemother 24(1):114–122
Vaara M, Vaara T (1983) Sensitization of Gram-negative bacteria to antibiotics and complement by a nontoxic oligopeptide. Nature 303(5917):526–528
Vaara M (1992) Agents that increase the permeability of the outer membrane. Microbiol Rev 56(3):395–411
Sato Y, Shindo M, Sakura N, Uchida Y, Kato I (2011) Novel des-fatty acyl-polymyxin B derivatives with Pseudomonas aeruginosa-specific antimicrobial activity. Chem Pharm Bull (Tokyo) 59(5):597–602
Viswanath DV, Jenkins HJ (1978) Neuromuscular block of the polymyxin group of antibiotics. J Pharm Sci 67(9):1275–1280
Singh YN, Marshall IG, Harvey AL (1982) Pre- and postjunctional blocking effects of aminoglycoside, polymyxin, tetracycline and lincosamide antibiotics. Br J Anaesth 54(12):1295–1306
Bairamashvili DI, Voitenko VG, Gushchin IS, Zinchenko AA, Miroshnikov AI (1989) The histamine-liberating action of polymyxin B and its analogs. Biull Eksp Biol Med 107(4):447–449
Voitenko VG, Bayramashvili DI, Zebrev AI, Zinchenko AA (1990) Relationship between structure and histamine releasing action of polymyxin B and its analogues. Agents Actions 30(1–2):153–156
Leese RA, inventor; Biosource Pharm, Inc., assignee (2010) Antibiotic composition for the treatment of Gram-negative infections. U.S patent US20100160215
Keith DD, Borders D, Curran W, Leese R, Mahamoon A, Jarolmen H et al eds (2010) Poster F1-1619 synthesis and activity of CB-182,804, a novel polymyxin analog active against clinically relevant Gram-negative bacteria. In: 50th Interscience conference on antimicrobial agents and chemotherapy, 2010 September 12–15, Boston, MA, USA
Sader HS, Rhomberg PR, Jones RN eds (2010) Poster F1-1626 Antimicrobial activity of a novel polymyxin analog (CB-182,804) tested against clinical strains of Gram-negative bacilli, including colistin resistant organisms. In: 50th interscience conference on antimicrobial agents and chemotherapy, Boston, USA
Quale J, Shah N, Kelly P, Babu E, Backer M, Rosas-Garcia G et al (2012) Activity of polymyxin B and the novel polymyxin analogue CB-182,804 against contemporary Gram-negative pathogens in New York City. Microb Drug Resist 18(2):132–136
Chen JM, Li ZB, Magee TV, Martinez CA, inventors; Pfizer Inc, assignee (2012) Polymyxin derivatives useful as antibacterial agents. patent WO2012168820
Magee TV, Brown MF, Starr JS, Ackley DC, Abramite JA, Aubrecht J et al (2013) Discovery of Dap-3 polymyxin analogues for the treatment of multidrug-resistant Gram-negative nosocomial infections. J Med Chem 56:5079–5093
Saadi M, Duperchy E, Brown P, Dawson MJ, Wadman SN, inventors; Cantab Anti-Infectives, assignee (2013) Polymyxin derivatives patent WO2013072695
Brown P, Dawson M, Simonovic M, Boakes S, Duperchy E, inventors; Cantab Anti-Infectives, assignee (2014) Polymyxin derivatives and their use in combination therapy together with different antibiotics. patent WO2014188178
Brown P, Dawson M, Simonovic M, Boakes S, Duperchy E, Stanway S, et al., inventors; Cantab Anti-Infectives, assignee (2015) Polymyxin derivatives and their use in combintion theapy together with different antibiotics. patent WO2015135976
Boakes S, Duperchy E, Brown P, Teague J, Payne LJ, Dawson MJ eds (2015) Novel polymyxin derivative CA824: efficacy in neutropenic mouse thigh and lung infection models. In: 55th interscience conference on antimicrobial agents and chemotherapy and 28th international congress of chemotherapy meeting, San Diego USA
Wiederhold NP, Jorgenson JH, Boakes S, Collins M, McElmeel, Cushion MT et al (2015) Anibacterial activity of novel polymyxin B derivatives against Gram-negative bacteria and intial toxicity assessment. In: 55th Interscience conference on antimicrobial agents and chemotherapy and 28th international congress of chemotherapy meeting, San Diego, USA
Spero therapeutics acquires next generation antibacterial candidates from Pro Bono Bio for treatment of multidrug-resistant, Gram-negative infections [press release]. January 31st, 2017
Arends S, Rhomberg P, Lister T, Cotroneo N, Rubio A, Flamm R et al (2018) In vitro activity evaluation of a next-generation polymyxin, SPR206, against non-fermentative gram-negative bacilli responsible for human infections. In: ESCMID/ASM conference on drug development to meet the challenge of antimicrobial resistance, Lisbon, Portugal
Arends S, Rhomberg P, Lister T, Cotroneo N, Rubio A, Flamm R et al (2018) Activity of an investigational polymyxin-B-like compound (SPR206) against a set of enterobacteriaceae organisms responsible for human infections. In: ESCMID/ASM conference on drug development to meet the challenge of antimicrobial resistance, Lisbon, Portugal
Author information
Authors and Affiliations
Corresponding authors
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2019 Springer Nature Switzerland AG
About this chapter
Cite this chapter
Velkov, T., Roberts, K.D. (2019). Discovery of Novel Polymyxin-Like Antibiotics. In: Li, J., Nation, R., Kaye, K. (eds) Polymyxin Antibiotics: From Laboratory Bench to Bedside. Advances in Experimental Medicine and Biology, vol 1145. Springer, Cham. https://doi.org/10.1007/978-3-030-16373-0_20
Download citation
DOI: https://doi.org/10.1007/978-3-030-16373-0_20
Published:
Publisher Name: Springer, Cham
Print ISBN: 978-3-030-16371-6
Online ISBN: 978-3-030-16373-0
eBook Packages: Biomedical and Life SciencesBiomedical and Life Sciences (R0)