Summary
Endosymbiotic transfer of DNA from the cytoplasmic organelles (mitochondria and chloroplasts) to the nucleus has been a major factor driving the origin of new nuclear genes, a process central to eukaryote evolution. Typically, transfer of organelle DNA to the nucleus is quickly followed by decay, deletion and rearrangement. However, in rare instances these new sequences lead to functional relocation of organelle genes to the nucleus or the generation of genes with novel function. Similar transfer of chloroplast DNA has also added to the complexity of plant mitochondrial genomes. Significantly, these processes are ongoing, making promiscuous organellar DNA an important contributor to the continued evolution of plant genomes.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
Abbreviations
- CaMV:
-
Cauliflower mosaic virus;
- DSB:
-
Double strand break;
- GUS:
-
β-glucuronidase;
- mtpt :
-
– Mitochondrial integrant of plastid DNA;
- MYA:
-
Million years ago;
- NHEJ:
-
Non-homologous end joining;
- norg – :
-
Nuclear integrant of organellar DNA;
- numt – :
-
Nuclear integrant of mitochondrial DNA;
- nupt – :
-
Nuclear integrant of plastid DNA;
- TAIL-PCR:
-
Thermal asymmetric interlaced PCR;
- T-DNA:
-
Transfer DNA;
- TOC/TIC:
-
Translocase at the outer/inner envelope membrane of chloroplasts;
- TOM/TIM:
-
Translocase at the outer/inner envelope membrane of mitochondria
References
Adams KL, Daley DO, Qiu YL, Whelan J, Palmer JD (2000) Repeated, recent and diverse transfers of a mitochondrial gene to the nucleus in flowering plants. Nature 408:354–357
Adams KL, Daley DO, Whelan J, Palmer JD, Mollier P, Hoffmann B, Debast C, Small I (2002) Genes for two mitochondrial ribosomal proteins in flowering plants are derived from their chloroplast or cytosolic counterparts. Plant Cell 14:931–943
Allen JF (2003) The function of genomes in bioenergetic organelles. Philos Trans R Soc Lond B Biol Sci 358:19–37
Allen JF, Raven JA (1996) Free-radical-induced mutation vs redox regulation: costs and benefits of genes in organelles. J Mol Evol 42:482–492
Allen JO, Fauron CM, Minx P, Roark L, Oddiraju S, Lin GN, Meyer L, Sun H, Kim K, Wang CY et al (2007) Comparisons among two fertile and three male-sterile mitochondrial genomes of maize. Genetics 177:1173–1192
Alverson AJ, Wei XX, Rice DW, Stern DB, Barry K, Palmer JD (2010) Insights into the evolution of mitochondrial genome size from complete sequences of Citrullus lanatus and Cucurbita pepo (Cucurbitaceae). Mol Biol Evol 27:1436–1448
Arthofer W, Schuler S, Steiner FM, Schlick-Steiner BC (2010) Chloroplast DNA-based studies in molecular ecology may be compromised by nuclear-encoded plastid sequence. Mol Ecol 19:3853–3856
Barbrook AC, Howe CJ, Purton S (2006) Why are plastid genomes retained in non-photosynthetic organisms? Trends Plant Sci 11:101–108
Behura SK (2007) Analysis of nuclear copies of mitochondrial sequences in honeybee (Apis mellifera) genome. Mol Biol Evol 24:1492–1505
Berg OG, Kurland CG (2000) Why mitochondrial genes are most often found in nuclei. Mol Biol Evol 17:951–961
Birky CW (2001) The inheritance of genes in mitochondria and chloroplasts: laws, mechanisms, and models. Annu Rev Genet 35:125–148
Blanchard JL, Lynch M (2000) Organellar genes: why do they end up in the nucleus? Trends Genet 16:315–320
Blitzblau HG, Bell GW, Rodriguez J, Bell SP, Hochwagen A (2007) Mapping of meiotic single-stranded DNA reveals double-strand-break hotspots near centromeres and telomeres. Curr Biol 17:2003–2012
Bock R, Timmis JN (2008) Reconstructing evolution: gene transfer from plastids to the nucleus. Bioessays 30:556–566
Boxma B, de Graaf RM, van der Staay GW, van Alen TA, Ricard G, Gabaldon T, van Hoek AH, Moon-van der Staay SY, Koopman WJ, van Hellemond JJ et al (2005) An anaerobic mitochondrion that produces hydrogen. Nature 434:74–79
Brandvain Y, Barker MS, Wade MJ (2007) Gene co-inheritance and gene transfer. Science 315:1685
Brouard JS, Otis C, Lemieux C, Turmel M (2010) The exceptionally large chloroplast genome of the green alga Floydiella terrestris illuminates the evolutionary history of the Chlorophyceae. Genome Biol Evol 2:240–256
Cavalier-Smith T, Lee JJ (1985) Protozoa as hosts for endosymbioses and the conversion of symbionts into organelles. J Protozool 32:376–379
Chaw SM, Shih ACC, Wang D, Wu YW, Liu SM, Chou TY (2008) The mitochondrial genome of the gymnosperm Cycas taitungensis contains a novel family of short interspersed elements, Bpu sequences, and abundant RNA editing sites. Mol Biol Evol 25:603–615
Cheung AY, Bogorad L, Vanmontagu M, Schell J (1988) Relocating a gene for herbicide tolerance: a chloroplast gene is converted into a nuclear gene. Proc Natl Acad Sci USA 85:391–395
Clemens DL, Johnson PJ (2000) Failure to detect DNA in hydrogenosomes of Trichomonas vaginalis by nick translation and immunomicroscopy. Mol Biochem Parasit 106:307–313
Clifton SW, Minx P, Fauron CMR, Gibson M, Allen JO, Sun H, Thompson M, Barbazuk WB, Kanuganti S, Tayloe C, Meyer L, Wilson RK, Newton KJ (2004) Sequence and comparative analysis of the maize NB mitochondrial genome. Plant Physiol 136:3486–3503
Cornelissen M, Vandewiele M (1989) Nuclear transcriptional activity of the plastid psbA promoter. Nucleic Acids Res 17:19–29
Cusack BP, Wolfe KH (2007) When gene marriages don’t work out: divorce by subfunctionalization. Trends Genet 23:270–272
Daley DO, Whelan J (2005) Why genes persist in organelle genomes. Genome Biol 6:110
Delannoy E, Fujii S, des Francs CC, Brundrett M, Small I (2011) Rampant gene loss in the underground Orchid Rhizanthella gardneri highlights evolutionary constraints on plastid genomes. Mol Biol Evol 28:2077–2086
Doolittle WE (1998) You are what you eat: a gene transfer ratchet could account for bacterial genes in eukaryotic nuclear genomes. Trends Genet 14:307–311
Figueroa P, Gomez I, Holuigue L, Araya A, Jordana X (1999) Transfer of rps14 from the mitochondrion to the nucleus in maize implied integration within a gene encoding the iran-sulphur subunit of succinate dehydrogenase and expression by alternative splicing. Plant J 18:601–609
Gallois JL, Achard P, Green G, Mache R (2001) The Arabidopsis chloroplast ribosomal protein L21 is encoded by a nuclear gene of mitochondrial origin. Gene 274:179–185
Gissi C, Iannelli F, Pesole G (2008) Evolution of the mitochondrial genome of Metazoa as exemplified by comparison of congeneric species. Heredity 101:301–320
Goremykin VV, Salamini F, Velasco R, Viola R (2009) Mitochondrial DNA of Vitis vinifera and the issue of rampant horizontal gene transfer. Mol Biol Evol 26:99–110
Grohmann L, Brennicke A, Schuster W (1992) The mitochondrial gene encoding ribosomal protein S12 has been translocated to the nuclear genome in Oenothera. Nucleic Acids Res 20:5641–5646
Guo XY, Ruan SL, Hu WM, Ca DG, Fan LJ (2008) Chloroplast DNA insertions into the nuclear genome of rice: the genes, sites and ages of insertion involved. Funct Integr Genomics 8:101–108
Hall AE, Kettler GC, Preuss D (2006) Dynamic evolution at pericentromeres. Genome Res 16:355–364
Handa H (2003) The complete nucleotide sequence and RNA editing content of the mitochondrial genome of rapeseed (Brassica napus L.): comparative analysis of the mitochondrial genomes of rapeseed and Arabidopsis thaliana. Nucleic Acids Res 31:5907–5916
Hao WL, Palmer JD (2009) Fine-scale mergers of chloroplast and mitochondrial genes create functional, transcompartmentally chimeric mitochondrial genes. Proc Natl Acad Sci USA 106:16728–16733
Haviv-Chesner A, Kobayashi Y, Gabriel A, Kupiec M (2007) Capture of linear fragments at a double-strand break in yeast. Nucleic Acids Res 35:5192–5202
Hazkani-Covo E, Zeller RM, Martin W (2010) Molecular poltergeists: mitochondrial DNA copies (numts) in sequenced nuclear genomes. PLoS Genet 6:e1000834
Henze K, Martin W (2001) How do mitochondrial genes get into the nucleus? Trends Genet 17:383–387
Huang CY, Ayliffe MA, Timmis JN (2003) Direct measurement of the transfer rate of chloroplast DNA into the nucleus. Nature 422:72–76
Huang CY, Ayliffe MA, Timmis JN (2004) Simple and complex nuclear loci created by newly transferred chloroplast DNA in tobacco. Proc Natl Acad Sci USA 101:9710–9715
Huang CY, Grunheit N, Ahmadinejad N, Timmis JN, Martin W (2005) Mutational decay and age of chloroplast and mitochondrial genomes transferred recently to angiosperm nuclear chromosomes. Plant Physiol 138:1723–1733
Kanno A, Nakazono M, Hirai A, Kameya T (1997) Maintenance of chloroplast-derived sequences in the mitochondrial DNA of gramineae. Curr Genet 32:413–419
Khakhlova O, Bock R (2006) Elimination of deleterious mutations in plastid genomes by gene conversion. Plant J 46:85–94
Kitazaki K, Kubo T (2010) Cost of having the largest mitochondrial genome: evolutionary mechanism of plant mitochondrial genome. J Bot 2010. doi:10.1155/2010/620137
Kleine T, Maier UG, Leister D (2009) DNA transfer from organelles to the nucleus: the idiosyncratic genetics of endosymbiosis. Annu Rev Plant Biol 60:115–138
Knoop V, Brennicke A (1991) A mitochondrial intron sequence in the 5′-flanking region of a plant nuclear lectin gene. Curr Genet 20:423–425
Knoop V, Unseld M, Marienfeld J, Brandt P, Sunkel S, Ullrich H, Brennicke A (1996) copia-, gypsy- and LINE-like retrotransposon fragments in the mitochondrial genome of Arabidopsis thaliana. Genetics 142:579–585
Kubo N, Arimura S (2010) Discovery of the rpl10 gene in diverse plant mitochondrial genomes and its probable replacement by the nuclear gene for chloroplast RPL10 in two lineages of angiosperms. DNA Res 17:1–9
Kubo T, Nishizawa S, Sugawara A, Itchoda N, Estiati A, Mikami T (2000) The complete nucleotide sequence of the mitochondrial genome of sugar beet (Beta vulgaris L.) reveals a novel gene for tRNA(Cys)(GCA). Nucleic Acids Res 28:2571–2576
Kundu M, Thompson CB (2005) Macroautophagy versus mitochondrial autophagy: a question of fate? Cell Death Differ 12:1484–1489
Leister D (2005) Origin, evolution and genetic effects of nuclear insertions of organelle DNA. Trends Genet 21:655–663
Lenglez S, Hermand D, Decottignies A (2010) Genome-wide mapping of nuclear mitochondrial DNA sequences links DNA replication origins to chromosomal double-strand break formation in Schizosaccharomyces pombe. Genome Res 20:1250–1261
Li HM, Chiu CC (2010) Protein transport into chloroplasts. Annu Rev Plant Biol 61:157–180
Li LB, Wang B, Liu Y, Qiu YL (2009) The complete mitochondrial genome sequence of the Hornwort Megaceros aenigmaticus shows a mixed mode of conservative yet dynamic evolution in early land plant mitochondrial genomes. J Mol Evol 68:665–678
Lim L, Linka M, Mullin KA, Weber APM, McFadden GI (2010) The carbon and energy sources of the non-photosynthetic plastid in the malaria parasite. FEBS Lett 584:549–554
Lin YF, Waldman AS (2001) Capture of DNA sequences at double-strand breaks in mammalian chromosomes. Genetics 158:1665–1674
Lin XY, Kaul SS, Rounsley S, Shea TP, Benito MI, Town CD, Fujii CY, Mason T, Bowman CL, Barnstead M et al (1999) Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Nature 402:761–768
Lister DL, Bateman JM, Purton S, Howe CJ (2003) DNA transfer from chloroplast to nucleus is much rarer in Chlamydomonas than in tobacco. Gene 316:33–38
Liu SL, Zhuang Y, Zhang P, Adams KL (2009) Comparative analysis of structural diversity and sequence evolution in plant mitochondrial genes transferred to the nucleus. Mol Biol Evol 26:875–891
Lloyd AH, Timmis JN (2011) The origin and characterization of new nuclear genes originating from a cytoplasmic organellar genome. Mol Biol Evol 28:2019–2028
Lough AN, Roark LM, Kato A, Ream TS, Lamb JC, Birchler JA, Newton KJ (2008) Mitochondrial DNA transfer to the nucleus generates extensive insertion site variation in maize. Genetics 178:47–55
Lynch M (1996) Mutation accumulation in transfer RNAs: molecular evidence for Muller’s ratchet in mitochondrial genomes. Mol Biol Evol 13:209–220
Magee AM, Aspinall S, Rice DW, Cusack BP, Semon M, Perry AS, Stefanovic S, Milbourne D, Barth S, Palmer JD, Gray JC, Kavanagh TA, Wolfe KH (2010) Localized hypermutation and associated gene losses in legume chloroplast genomes. Genome Res 20:1700–1710
Marechal A, Brisson N (2010) Recombination and the maintenance of plant organelle genome stability. New Phytol 186:299–317
Martin W, Herrmann RG (1998) Gene transfer from organelles to the nucleus: how much, what happens, and why? Plant Physiol 118:9–17
Martin W, Rujan T, Richly E, Hansen A, Cornelsen S, Lins T, Leister D, Stoebe B, Hasegawa M, Penny D (2002) Evolutionary analysis of Arabidopsis, cyanobacterial, and chloroplast genomes reveals plastid phylogeny and thousands of cyanobacterial genes in the nucleus. Proc Natl Acad Sci USA 99:12246–12251
Matsuo M, Ito Y, Yamauchi R, Obokata J (2005) The rice nuclear genome continuously integrates, shuffles, and eliminates the chloroplast genome to cause chloroplast-nuclear DNA flux. Plant Cell 17:665–675
Millar AH, Whelan J, Small I (2006) Recent surprises in protein targeting to mitochondria and plastids. Curr Opin Plant Biol 9:610–615
Millen RS, Olmstead RG, Adams KL, Palmer JD, Lao NT, Heggie L, Kavanagh TA, Hibberd JM, Giray JC, Morden CW, Calie PJ, Jermiin LS, Wolfe KH (2001) Many parallel losses of infA from chloroplast DNA during angiosperm evolution with multiple independent transfers to the nucleus. Plant Cell 13:645–658
Ming R, Hou SB, Feng Y, Yu QY, Dionne-Laporte A, Saw JH, Senin P, Wang W, Ly BV, Lewis KLT et al (2008) The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus). Nature 452:991–996
Mishmar D, Ruiz-Pesini E, Brandon M, Wallace DC (2004) Mitochondrial DNA-like sequences in the nucleus (NUMTs): insights into our African origins and the mechanism of foreign DNA integration. Hum Mutat 23:125–133
Miyata S, Nakazono M, Hirai A (1998) Transcription of plastid derived tRNA genes in rice mitochondria. Curr Genet 34:216–220
Nakazono M, Nishiwaki S, Tsutsumi N, Hirai A (1996) A chloroplast-derived sequence is utilized as a source of promotes sequences for the gene for subunit 9 of NADH dehydrogenase (nad9) in rice mitochondria. Mol Gen Genet 252:371–378
NCBI (2011) NCBI eukaryotae organelles list. http://www.ncbi.nlm.nih.gov/genomes/GenomesHome.cgi?taxid=2759&hopt=html. Accessed 25 Mar 2011
Neupert W (1997) Protein import into mitochondria. Annu Rev Biochem 66:863–917
Notsu Y, Masood S, Nishikawa T, Kubo N, Akiduki G, Nakazono M, Hirai A, Kadowaki K (2002) The complete sequence of the rice (Oryza sativa L.) mitochondrial genome: frequent DNA sequence acquisition and loss during the evolution of flowering plants. Mol Genet Genomics 268:434–445
Noutsos C, Richly E, Leister D (2005) Generation and evolutionary fate of insertions of organelle DNA in the nuclear genomes of flowering plants. Genome Res 15:616–628
Noutsos C, Kleine T, Armbruster U, DalCorso G, Leister D (2007) Nuclear insertions of organellar DNA can create novel patches of functional exon sequences. Trends Genet 23:597–601
Nugent JM, Palmer JD (1991) RNA-mediated transfer of the gene coxII from the mitochondrion to the nucleus during flowering plant evolution. Cell 66:473–481
Oda K, Yamato K, Ohta E, Nakamura Y, Takemura M, Nozato N, Akashi K, Kanegae T, Ogura Y, Kohchi T, Ohyama K (1992) Gene organization deduced from the complete sequence of liverwort Marchantia polymorpha mitochondrial DNA: a primitive form of plant mitochondrial genome. J Mol Biol 223:1–7
Ogihara Y, Yamazaki Y, Murai K, Kanno A, Terachi T, Shiina T, Miyashita N, Nasuda S, Nakamura C, Mori N, Takumi S, Murata M, Futo S, Tsunewaki K (2005) Structural dynamics of cereal mitochondrial genomes as revealed by complete nucleotide sequencing of the wheat mitochondrial genome. Nucleic Acids Res 33:6235–6250
Puthiyaveetil S, Kavanagh TA, Cain P, Sullivan JA, Newell CA, Gray JC, Robinson C, van der Giezen M, Rogers MB, Allen JF (2008) The ancestral symbiont sensor kinase CSK links photosynthesis with gene expression in chloroplasts. Proc Natl Acad Sci USA 105:10061–10066
Reith M, Munholland J (1995) Complete nucleotide sequence of the Porphyra purpurea chloroplast genome. Plant Mol Biol Rep 13:333–335
Ricchetti M, Fairhead C, Dujon B (1999) Mitochondrial DNA repairs double-strand breaks in yeast chromosomes. Nature 402:96–100
Richly E, Leister D (2004a) NUMTs in sequenced eukaryotic genomes. Mol Biol Evol 21:1081–1084
Richly E, Leister D (2004b) NUPTs in sequenced eukaryotes and their genomic organization in relation to NUMTs. Mol Biol Evol 21:1972–1980
Roark LM, Hui Y, Donnelly L, Birchler JA, Newton KJ (2010) Recent and frequent insertions of chloroplast DNA into maize nuclear chromosomes. Cytogenet Genome Res 129:17–23
Rousseau-Gueutin M, Lloyd AH, Sheppard AE, Timmis JN (2011) Gene transfer to the nucleus. In: Bullerwell CE (ed) Organelle genetics: evolution of organelle genomes and gene expression. Springer, Berlin, pp 147–171
Ruf S, Karcher D, Bock R (2007) Determining the transgene containment level provided by chloroplast transformation. Proc Natl Acad Sci USA 104:6998–7002
Ruf S, Braune S, Endries P, Hasse C, Stegemann S, Bock R (2010) Plastid transmission, gene transfer and the impact of the environment. ISCGGE, Maynooth
Salomon S, Puchta H (1998) Capture of genomic and T-DNA sequences during double-strand break repair in somatic plant cells. EMBO J 17:6086–6095
Selosse M, Albert B, Godelle B, Berg OG, Kurland CG (2001) Reducing the genome size of organelles favours gene transfer to the nucleus. Trends Ecol Evol 16:135–141
Sheppard AE, Timmis JN (2009) Instability of plastid DNA in the nuclear genome. PLoS Genet 5:e1000323
Sheppard AE, Ayliffe MA, Blatch L, Day A, Delaney SK, Khairul-Fahmy N, Li Y, Madesis P, Pryor AJ, Timmis JN (2008) Transfer of plastid DNA to the nucleus is elevated during male gametogenesis in tobacco. Plant Physiol 148:328–336
Sheppard AE, Panagiotis M, Lloyd AH, Day A, Ayliffe MA, Timmis JN (2011) Introducing an RNA editing requirement into a plastid-localised transgene reduces but does not eliminate functional gene transfer to the nucleus. Plant Mol Biol 76:299–309
Sloan DB, Alverson AJ, Storchova H, Palmer JD, Taylor DR (2010) Extensive loss of translational genes in the structurally dynamic mitochondrial genome of the angiosperm Silene latifolia. BMC Evol Biol 10:e274
Smith DR, Lee RW (2008) Mitochondrial genome of the colorless green alga Polytomella capuana: a linear molecule with an unprecedented GC content. Mol Biol Evol 25:487–496
Soll J, Schleiff E (2004) Protein import into chloroplasts. Nat Rev Mol Cell Biol 5:198–208
Stegemann S, Bock R (2006) Experimental reconstruction of functional gene transfer from the tobacco plastid genome to the nucleus. Plant Cell 18:2869–2878
Stegemann S, Hartmann S, Ruf S, Bock R (2003) High-frequency gene transfer from the chloroplast genome to the nucleus. Proc Natl Acad Sci USA 100:8828–8833
Stern DB, Lonsdale DM (1982) Mitochondrial and chloroplast genomes of maize have a 12-kilobase DNA sequence in common. Nature 299:698–702
Stettler M, Eicke S, Mettler T, Messerli G, Hortensteiner S, Zeeman SC (2009) Blocking the metabolism of starch breakdown products in Arabidopsis leaves triggers chloroplast degradation. Mol Plant 2:1233–1246
Stupar RM, Lilly JW, Town CD, Cheng Z, Kaul S, Buell CR, Jiang JM (2001) Complex mtDNA constitutes an approximate 620-kb insertion on Arabidopsis thaliana chromosome 2: implication of potential sequencing errors caused by large-unit repeats. Proc Natl Acad Sci USA 98:5099–5103
Sugiyama Y, Watase Y, Nagase M, Makita N, Yagura S, Hirai A, Sugiura M (2005) The complete nucleotide sequence and multipartite organization of the tobacco mitochondrial genome: comparative analysis of mitochondrial genomes in higher plants. Mol Genet Genomics 272:603–615
Svab Z, Hajdukiewicz P, Maliga P (1990) Stable transformation of plastids in higher plants. Proc Natl Acad Sci USA 87:8526–8530
Terasawa K, Odahara M, Kabeya Y, Kikugawa T, Sekine Y, Fujiwara M, Sato N (2007) The mitochondrial genome of the moss Physcomitrella patens sheds new light on mitochondrial evolution in land plants. Mol Biol Evol 24:699–709
The Rice Chromosome 10 Sequencing Consortium (2003) In-depth view of structure, activity, and evolution of rice chromosome 10. Science 300:1566–1569
Thorsness PE, Fox TD (1990) Escape of DNA from mitochondria to the nucleus in Saccharomyces cerevisiae. Nature 346:376–379
Timmis JN, Scott NS (1983) Sequence homology between spinach nuclear and chloroplast genomes. Nature 305:65–67
Timmis JN, Ayliffe MA, Huang CY, Martin W (2004) Endosymbiotic gene transfer: organelle genomes forge eukaryotic chromosomes. Nat Rev Genet 5:123–136
Turmel M, Otis C, Lemieux C (2003) The mitochondrial genome of Chara vulgaris: insights into the mitochondrial DNA architecture of the last common ancestor of green algae and land plants. Plant Cell 15:1888–1903
Ueda M, Nishikawa T, Fujimoto M, Takanashi H, Arimura S, Tsutsumi N, Kadowaki K (2008) Substitution of the gene for chloroplast RPS16 was assisted by generation of a dual targeting signal. Mol Biol Evol 25:1566–1575
Unseld M, Marienfeld JR, Brandt P, Brennicke A (1997) The mitochondrial genome of Arabidopsis thaliana contains 57 genes in 366,924 nucleotides. Nat Genet 15:57–61
van den Boogaart P, Samallo J, Agsteribbe E (1982) Similar genes for a mitochondrial ATPase subunit in the nuclear and mitochondrial genomes of Neurospora crassa. Nature 298:187–189
van der Giezen M, Sjollema KA, Artz RR, Alkema W, Prins RA (1997) Hydrogenosomes in the anaerobic fungus Neocallimastix frontalis have a double membrane but lack an associated organelle genome. FEBS Lett 408:147–150
Villarejo A, Buren S, Larsson S, Dejardin A, Monne M, Rudhe C, Karlsson J, Jansson S, Lerouge P, Rolland N, von Heijne G, Grebe M, Bako L, Samuelsson G (2005) Evidence for a protein transported through the secretory pathway en route to the higher plant chloroplast. Nat Cell Biol 7:1224–1231
Vogel JP, Garvin DF, Mockler TC, Schmutz J, Rokhsar D, Bevan MW, Barry K, Lucas S, Harmon-Smith M, Lail K et al (2010) Genome sequencing and analysis of the model grass Brachypodium distachyon. Nature 463:763–768
Vonheijne G (1986) Why mitochondria need a genome. FEBS Lett 198:1–4
Wada S, Ishida H, Izumi M, Yoshimoto K, Ohsumi Y, Mae T, Makino A (2009) Autophagy plays a role in chloroplast degradation during senescence in individually darkened leaves. Plant Physiol 149:885–893
Wang D, Wu YW, Shih ACC, Wu CS, Wang YN, Chaw SM (2007) Transfer of chloroplast genomic DNA to mitochondrial genome occurred at least 300 MYA. Mol Biol Evol 24:2040–2048
Wilson RJM, Denny PW, Preiser PR, Rangachari K, Roberts K, Roy A, Whyte A, Strath M, Moore DJ, Moore PW, Williamson DH (1996) Complete gene map of the plastid-like DNA of the malaria parasite Plasmodium falciparum. J Mol Biol 261:155–172
Wolfe KH, Li WH, Sharp PM (1987) Rates of nucleotide substitution vary greatly among plant mitochondrial, chloroplast, and nuclear DNAs. Proc Natl Acad Sci USA 84:9054–9058
Acknowledgements
We thank the Australian Research Council for financial support (Grants DP0667006 and DP0986973). This chapter is not intended to be an exhaustive review of the topic. Therefore we apologise for omitting citation and discussion of some important research contributions in the interest of brevity. We thank David Adelson for discussion.
Author information
Authors and Affiliations
Corresponding author
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2012 Springer Science+Business Media B.V.
About this chapter
Cite this chapter
Lloyd, A.H., Rousseau-Gueutin, M., Timmis, J.N., Sheppard, A.E., Ayliffe, M.A. (2012). Promiscuous Organellar DNA. In: Bock, R., Knoop, V. (eds) Genomics of Chloroplasts and Mitochondria. Advances in Photosynthesis and Respiration, vol 35. Springer, Dordrecht. https://doi.org/10.1007/978-94-007-2920-9_9
Download citation
DOI: https://doi.org/10.1007/978-94-007-2920-9_9
Published:
Publisher Name: Springer, Dordrecht
Print ISBN: 978-94-007-2919-3
Online ISBN: 978-94-007-2920-9
eBook Packages: Biomedical and Life SciencesBiomedical and Life Sciences (R0)