Skip to main content
Log in

The complete amino-acid sequence of the rieske FeS-precursor protein from spinach chloroplasts deduced from cDNA analysis

  • Published:
Molecular and General Genetics MGG Aims and scope Submit manuscript

Summary

Summary

Several cDNA clones encoding the entire Rieske FeS-precursor protein of the chloroplast cytochrome b 6 f-complex have been isolated by high density plaque immunoscreening of a phage lambda gt11 cDNA expression library, made from poly A+-RNA of spinach seedlings. The identity of the cDNAs has been confirmed by N-terminal amino acid sequencing of the purified protein. The nucleotide sequence indicates a protein of 247 amino acid residues including a putative transit sequence of 68 amino acids corresponding to molecular masses of 26.3 kDa (precursor) and 18.8 kDa (mature protein; 179 amino acid residues). Alignteins of the sequence with sequences from Rieske FeS-proteins of respiratory electron transport chains, two of bacterial and three of mitochondrial origin, shows little sequence homology, but remarkable similarity in secondary structure including a putative N-terminal transmembrane segment of about 25 residues and the peptides CTHLGCV and CPCHGS in the C-terminal region of the protein that are involved in the binding of the Fe2S2-cluster.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  • Alt J, Herrmann RG (1984) Nucleotide sequence of the gene for pre-apocytochrome f in the spinach plastid chromosome. Curr Genet 8:551–557

    Google Scholar 

  • Alt J, Westhoff P, Sears BB, Nelson N, Hurt E, Hauska G, Herrmann RG (1983) Genes and transcripts for the polypeptides of the cytochrome b 6/f complex from spinach thylakoid membranes. EMBO J 2:979–986

    Google Scholar 

  • Chou PY, Fasman GD (1978) Prediction of the secondary structure of proteins from their amino acid sequence. Adv Enzymol 47:45–148

    Google Scholar 

  • Cline JF, Hoffmann BM, Mims WB, LaHaie E, Ballou DP, Fee JA (1985) Evidence for N coordination to Fe in the [2Fe-2S] clusters of Thermus Rieske protein and phthalata dioxygenase from Pseudomonas. J Biol Chem 260:3251–3254

    Google Scholar 

  • Gabellini N, Sebald W (1986) Nucleotide sequence and transcription of the fbc operon from Rhodopseudomonas sphaeroides. Evaluation of the deduced amino acid sequences of the FeS protien, cytochrome b and cytochrome c 1. Eur J Biochem 154:569–579

    Google Scholar 

  • Gabellini N, Harnisch U, McCarthy JEG, Hauska G, Sebald W (1985) Cloning and expression of the fbc operon encoding the FeS protein, cytochrome b and cytochrome c 1 from Rhodopseudomonas sphaeroides b/c 1 complex. EMBO J 4:549–553

    Google Scholar 

  • Gilbert W (1979) Introns and exons. Playgrounds of evolution. In: Axel R, Maniatis T, Fox CF (eds) Eukaryotic gene regulation. Symposium on molecular and cellular biology. Academic Press, New York, Vol 14, pp 1–14

    Google Scholar 

  • Harnisch U, Weiss H, Sebald W (1985) The primary structure of the iron-sulfur subunit of ubiquinol-cytochrome c reductase from Neurospora, determined by cDNA and gene sequencing. Eur J Biochem 149:95–99

    Google Scholar 

  • Hartl F-U, Schmidt B, Wachter E, Weiss H, Neupert W (1986) Transport into mitochondria and intramitochondrial sorting of ubiquinol-cytochrome c reductase. Cell 47:939–951

    Google Scholar 

  • Hauska G, Hurt E, Gabellini N, Lockau W (1983) Comparative aspects of quinol-cytochrome c/plastocyanin oxidoreductases. Biochim Biophys Acta 726:97–133

    Google Scholar 

  • Heinemeyer W, Alt J, Herrmann RG (1984) Nucleotide sequence of the clustered genes for apocytochrome b 6 and subunit 4 of the cytochrome b/f complex in the spinach plastid chromosome. Curr Genet 8:543–549

    Google Scholar 

  • Herrmann RG, Westhoff P, Alt J, Tittgen J, Nelson N (1985) Thylakoid membrane proteins and their genes. In: van Vloten-Doting L, Groot GSP, Hall TC (eds) Molecular form and function of the plant genome. Plenum, New York, pp 233–256

    Google Scholar 

  • Hurt G, Hauska G, Malkin R (1981) Isolation of the Rieske ironsulfur protein from the cytochrome b 6/f complex of spinach chloroplasts. FEBS Lett 134:1–5

    Google Scholar 

  • Huynh TV, Young RA, Davis RW (1985) Constructing and screeing cDNA libraris in λgt 10 and λgt 11. In: Glover DM (ed) DNA cloning: a practical approach, Vol 1. IRL-Press, Oxford, Washington DC, pp 49–88

    Google Scholar 

  • Jansen T, Rother C, Steppuhn J, Reinke H, Beyreuther K, Jansson C, Andersson B, Herrmann RG (1987) Nucleotide sequence of cDNA clones encoding the complete “23 kd” and “16 kd” precursor proteins associated with the photosynthetic oxygenevolving complex from spinach. JEBS Lett, 216:234–240

    Google Scholar 

  • Karlin-Neumann GA, Tobin EM (1986) Transit peptides of nuclear-encoded chloroplast proteins share a common amino acid framework. EMBO J 5:9–13

    Google Scholar 

  • Kozak M (1986) Point mutations define a sequence flanking the AUG initiator codon that modulates translation by eukaryotic ribosomes. Cell 44:283–292

    Google Scholar 

  • Kozak M, Shatkin AJ (1978) Identification of features in 5′ terminal fragments from reovirus mRNA which are important for ribosome binding. Cell 13:201–212

    Google Scholar 

  • Kyte J, Doolittle RF (1982) A simple method for displaying the hydropathic character of a protein. J Mol Biol 157:105–132

    Google Scholar 

  • Malkin R, Aparicio PJ (1975) Identification of a g=1.90 high-potential iron sulfur protein in chloroplasts. Biochem Biophys Res Commun 63:1157–1160

    Google Scholar 

  • Mansfield RW, Anderson JM (1985) Transverse organization of components within the chloroplast cytochrome b-563/f complex. Biochim Biophys Acta 809:435–444

    Google Scholar 

  • Maxam AM, Gilbert W (1980) Sequencing end-labelled DNA with base-specific chemical cleavages. Methods Enzymol 65:499–560

    Google Scholar 

  • Nitschke W, Hauska G (1987) Structural studies on cytochrome b 6 and the Rieske FeS-center. In: Biggens J (ed) Progress in photosynthesis research, Vol. II. Martinus Nijhoff, Dordrecht

    Google Scholar 

  • Pfefferkorn B, Meyer HE (1986) N-terminal amino acid sequence of the Rieske iron-sulfur protein from the cytochrome b 6/f-complex of spinach thylakoids. FEBS Lett 206:233–237

    Google Scholar 

  • Rieske JS (1976) Composition, structure and function of complex III of the respiratory chain. Biochim Biophys Acta 456:195–212

    Google Scholar 

  • Rieske JS, Zaugg WS, Hansen RE (1964) Studies on the electron transfer system. LIX. distribution of iron and of the component giving an electron paramagnetic resonance signal at g=1.90 in subfractions of complex III. J Biol Chem 239:3017–3022

    Google Scholar 

  • Robinson C, Ellis RJ (1984) Transport of proteins into chloroplasts, partial purification of a chloroplast protease involved in the processing of imported precursor polypeptides. Eur J Biochem 142:337–342

    Google Scholar 

  • Rother C, Jansen T, Tyagi A, Tittgen J, Herrmann RG (1986) Plastocyanin is encoded by an uninterrupted nuclear gene in spinach. Curr Genet 11:171–176

    Google Scholar 

  • Salnikow J (1986) Automated solid-phase microsequencing using DABITC, on-column immobilization of proteins. In: Wittmann-Liebold B, Salnikow J, Erdmann VA (eds) Advanced methods in protein microsequence analysis. Springer, Berlin Heidelberg, pp 108–116

    Google Scholar 

  • Schägger H, Borchart U, Machleidt W, Link TA, von Jagow G (1987) Isolation and amino acid sequence of the “Rieske” iron sulfur protein of beef heart ubiquinol:cytochrome c reductase. FEBS Lett 219:161–168

    Google Scholar 

  • Smeekens S, deGroot M, van Binsbergen J, Weisbeek P (1985) Sequence of the precursor of the chloroplast thylakoid lumen protein plastocyanin. Nature 317:456–458

    Google Scholar 

  • Tittgen J, Hermans J, Steppuhn J, Jansen T, Jansson C, Andersson B, Nechushtai R, Nelson N, Herrmann RG (1986) Isolation of cDNA clones for fourteen nuclear-encoded thylakoid membrane proteins. Mol Gen Genet 204:258–265

    Google Scholar 

  • Trumpower BL (1981) Function of the iron-sulfur protein of the cytochrome b-c 1 segement in electron-transfer and energy-conserving reactions of the mitochondrial respiratory chain. Biochim Biophys Acta 639:129–155

    Google Scholar 

  • Tyagi A, Hermans J, Steppuhn J, Jasson C, Vater F, Herrmann RG (1987) Nucleotide sequence of cDNA clones encoding the complete “33 kd” precursor protein associated with the photosynthetic oxygen-evolving complex from spinach. Mol Gen Genet 207:288–293

    Google Scholar 

  • von Heijne G (1986) Towards a comparative anatomy of N-terminal topogenic protein sequences. J Mol Biol 189:239–242

    Google Scholar 

  • Westhoff P (1985) Transcription of the gene encoding the 51 kg chlorophyll a-apoprotein of the photosystem II reaction centre from spinach. Mol Gen Genet 201:115–123

    Google Scholar 

  • Westhoff P, Herrmann RG (1987) complex RNA maturation in chloroplasts: The psbB operon from spinach. Eur J Biochem (submitted)

  • Westhoff P, Jansson C, Klein-Hitpaß L, Berzborn R, Larsson C, Bartlett SG (1985) Intracellular coding sides of polypeptides associated with photosynthetic oxygen evolution of photosystem II. Plant Mol Biol 4:137–146

    Google Scholar 

  • Widger WR, Cramer WA, Herrmann RG, Trebst A (1984) Sequence homology and structural similarity between cytochrome b of mitochondrial complex III and the chloroplast b 6/f complex: Position of the cytochrome b hemes in the membrane. Proc Natl Acad Sci USA 81:674–678

    Google Scholar 

  • Willey DL, Howe CJ, Auffret AD, Bowman CM, Dyer TA, Gray JC (1984) Location and nucleotide sequence of the gene for cytochrome f in wheat chloroplast DNA. Mol Gen Genet 194:416–422

    Google Scholar 

  • Young RA, Davis RW (1983) Efficient isolation of genes by using antibody probes. Proc Natl Acad Sci USA 80:1194–1198

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Additional information

Communicated by C.P. Hollenberg

Rights and permissions

Reprints and permissions

About this article

Cite this article

Steppuhn, J., Rother, C., Hermans, J. et al. The complete amino-acid sequence of the rieske FeS-precursor protein from spinach chloroplasts deduced from cDNA analysis. Mol Gen Genet 210, 171–177 (1987). https://doi.org/10.1007/BF00337775

Download citation

  • Received:

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF00337775

Key words

Navigation