Skip to main content
Log in

Unraveling the intraspecific phylogeography of snotsCalidris canutus: a progress report on the search for genetic markers

  • Published:
Journal für Ornithologie Aims and scope Submit manuscript

Abstract

Mitochondrial DNA control region sequences of 25 Knots sampled from 10 populations and possibly four subspecies (canutus, islandica, rogersi, rufa) were obtained by PCR and direct sequencing. Only 7 haplotypes were found worldwide, all closely related to one another and differing by 1–3 substitutions. Knots have most probably expanded to their current population size from a refugial population that was severely bottlenecked late in the Pleistocene. Preliminary results from RAPDs are consistent with this prediction, in that Knots from North America appear to be genetically distinct from Knots elsewhere.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

Literature

  • Allendorf, F. W., &R. F. Leary (1986): Heterozygosity and fitness in natural populations of animals. In:M. E. Soulé, Conservation Biology: 57–76. Sunderland, Mass.

    Google Scholar 

  • Baker, A. J. (1992): Molecular genetics ofCalidris, with special reference to Knots. Wader Study Group Bull. 64, Suppl.: 29–35.

    Google Scholar 

  • Birky, C. W., T. Maruyama &P. Fuerst (1983): An approach to population and evolutionary genetic theory for genes in mitochondria and chloroplasts, and some results. Genetics 103: 513–527.

    Article  Google Scholar 

  • Brown, W. M., M. B. George &A. C. Wilson (1979): Rapid evolution of animal mitochondrial DNA. Proc. Natl. Acad. Sci. USA 76: 1967–1971.

    Article  CAS  Google Scholar 

  • Carr, S. M., &O. M. Griffith (1987): Rapid isolation of animal mitochondrial DNA in a small fixed-angle rotor at ultrahigh speed. Biochem. Genet. 25: 385–391.

    Article  CAS  Google Scholar 

  • Davidson, N. C., &T. Piersma (1992): The migration of Knots: conservation needs and implications. Wader Study Group Bull. 64, Suppl.: 198–209.

    Google Scholar 

  • Denton, G. H., &T. J. Hughes (1981): The Last Great Ice Sheets. N. Y.

  • Falconer, D. S. (1981): Introduction to quantitative genetics. N. Y.

  • Hartl, D. L., &A. G. Clark (1989): Principles of population genetics. Sunderland, Mass.

    Google Scholar 

  • Latter, B. D. H. (1973): The island model of differentiation: A general solution. Genetics 73: 147–157.

    Article  CAS  Google Scholar 

  • Levitan, D. R., &R. K. Grosberg (1993): The analysis of paternity and maternity in the marine hydrozoanHydractinia symbiolongicarpus using randomly amplified polymorphic DNA (RAPD) markers. Mol. Ecol. 2: 315–326.

    Article  CAS  Google Scholar 

  • O'Brien, S. J., M. E. Roelke, L. Marker, A. Newman, C. A. Winkler, D. Meltzer, L. Colly, J. F. Evermann, M. Bush &D. E. Wildt (1985): Genetic basis for species vulnerability in the cheetah. Science 227: 1428–1434.

    Article  CAS  Google Scholar 

  • Nilsson, T. (1983): The Pleistocene: Geology and life in the quaternary ice age. Dordrecht.

  • Pielou, E. C. (1991): After the ice age. The return of life to glaciated North America. Chicago.

  • Piersma, T., &N. C. Davidson (1992): The migrations and annual cycles of five subspecies of Knots in perspective. Wader Study Group Bull. 64, Suppl.: 187–197.

    Google Scholar 

  • Piersma, T., P. Prokosch &D. Bredin (1992): The migration system of Afro-Siberian KnotsCalidris canutus canutus. Wader Study Group Bull. 64, Suppl.: 52–63.

    Google Scholar 

  • Piersma, T., R. Hoekstra, A. Dekinga, A. Koolhaas, P. A. Wolf, P. Battley &P. Wiersma (1993): Scale and intensity of intertidal habitat use by KnotsCalidris canutus in the western Wadden Sea in relation to food, friends and foes. Neth. J. Sea Res. 31: 331–357.

    Article  Google Scholar 

  • Prater, A. J. (1972): The ecology of Morecambe Bay. III. The food and feeding habits of Knot (Calidris canutus L.) in Morecambe Bay. J. appl. Ecol. 9: 179–194.

    Article  Google Scholar 

  • Queller, D. C., J. E. Strassman &C. R. Hughes (1993): Microsatellites and kinship. Trends Ecol. Evol. 8: 285–288.

    Article  CAS  Google Scholar 

  • Quinn, T. W. (1992): The genetic legacy of mother goose—phylogeographic patterns of lesser snow gooseChen caerulescens caerulescens maternal lineages. Mol. Ecol. 1:105–117.

    Article  CAS  Google Scholar 

  • Sambrook, J., E. F. Fritsch, &T. Maniatis (1989): Molecular cloning. Cold Spring Harbor, N. Y.

    Google Scholar 

  • Swofford, D. L. (1989): PAUP. Phylogenetic analysis using parsimony version 3.0. Champaign, Ill.

  • Tomkovich, P. S. (1992): An analysis of the geographic variation in KnotsCalidris canutus based on museum skins. Wader Study Group Bull. 64, Suppl.: 17–23.

    Google Scholar 

  • Wenink, P. W., A. J. Baker &M. G. J. Tilanus (1993): Hypervariable-control-region sequences reveal global population structuring in a long-distance migrant shorebird, the Dunlin (Calidris alpina). Proc. Natl. Acad. Sci. USA 90: 94–98.

    Article  CAS  Google Scholar 

  • Ditto (1994) Mitochondrial control region sequences in two shorebird species, the turnstone and the dunlin, and their utility in population genetic studies. Mol. Biol. Evol. 11: 22–31.

    CAS  PubMed  Google Scholar 

  • Williams, J. G. K., A. R. Kublik, K. J. Livak, J. A. Rafalski &S. V. Tingey (1990): DNA polymorphisms amplified by arbitrary primers are useful as genetic markers. Nuc. Acids Res. 18: 6531–6535.

    Article  CAS  Google Scholar 

  • Wilson A. C., R. L. Cann, S. M. Carr, M. George, U. B. Gyllensten, K. M. Helm-Bychowski, R. G. Higuchi, S. R. Palumbi, E. M. Prager, R. D. Sage &M. Stoneking (1985): Mitochondrial DNA and two perspectives on evolutionary genetics. Biol. J. Linn. Soc. 26: 375–400.

    Article  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Rights and permissions

Reprints and permissions

About this article

Cite this article

Baker, A.J., Piersma, T. & Rosenmeier, L. Unraveling the intraspecific phylogeography of snotsCalidris canutus: a progress report on the search for genetic markers. J Ornithol 135, 599–608 (1994). https://doi.org/10.1007/BF01649854

Download citation

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF01649854

Keywords

Navigation