Skip to main content

Advertisement

Log in

Automatic, three-segment, MR-based attenuation correction for whole-body PET/MR data

  • Original Article
  • Published:
European Journal of Nuclear Medicine and Molecular Imaging Aims and scope Submit manuscript

Abstract

Purpose

The combination of positron emission tomography (PET) and magnetic resonance (MR) tomography in a single device is anticipated to be the next step following PET/CT for future molecular imaging application. Compared to CT, the main advantages of MR are versatile soft tissue contrast and its capability to acquire functional information without ionizing radiation. However, MR is not capable of measuring a physical quantity that would allow a direct derivation of the attenuation values for high-energy photons.

Methods

To overcome this problem, we propose a fully automated approach that uses a dedicated T1-weighted MR sequence in combination with a customized image processing technique to derive attenuation maps for whole-body PET. The algorithm automatically identifies the outer contour of the body and the lungs using region-growing techniques in combination with an intensity analysis for automatic threshold estimation. No user interaction is required to generate the attenuation map.

Results

The accuracy of the proposed MR-based attenuation correction (AC) approach was evaluated in a clinical study using whole-body PET/CT and MR images of the same patients (n = 15). The segmentation of the body and lung contour (L-R directions) was evaluated via a four-point scale in comparison to the original MR image (mean values >3.8). PET images were reconstructed using elastically registered MR-based and CT-based (segmented and non-segmented) attenuation maps. The MR-based AC showed similar behaviour as CT-based AC and similar accuracy as offered by segmented CT-based AC. Standardized uptake value (SUV) comparisons with reference to CT-based AC using predefined attenuation coefficients showed the largest difference for bone lesions (mean value ± standard variation of SUVmax: −3.0% ± 3.9% for MR; −6.5% ± 4.1% for segmented CT). A blind comparison of PET images corrected with segmented MR-based, CT-based and segmented CT-based AC afforded identical lesion detectability, but slight differences in image quality were found.

Conclusion

Our MR‐based attenuation correction method offers similar correction accuracy as offered by segmented CT. According to the specialists involved in the blind study, these differences do not affect the diagnostic value of the PET images.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3
Fig. 4
Fig. 5
Fig. 6
Fig. 7
Fig. 8
Fig. 9
Fig. 10
Fig. 11
Fig. 12
Fig. 13
Fig. 14
Fig. 15

Similar content being viewed by others

References

  1. Kops ER, Herzog H. Alternative methods for attenuation correction for PET images in MR-PET scanners. IEEE Nucl Sci Symp Conf Rec 2007;6:4327–30.

    Google Scholar 

  2. Catana A, et al. Is accurate bone segmentation required for MR-based PET attenuation correction? Proc Intl Soc Mag Reson Med 2009;17:593.

    Google Scholar 

  3. Beyer T, Weigert M, Quick HH, Pietrzyk U, Vogt F, Palm C, et al. MR-based attenuation correction for torso-PET/MR imaging: pitfalls in mapping MR to CT data. Eur J Nucl Med Mol Imaging 2008;35:1142–6.

    Article  PubMed  Google Scholar 

  4. van der Kouwe AJ, et al. Challenges for MR-based attenuation correction in PET imaging of the head. Proc Intl Soc Mag Reson Med 2009;17:2810.

    Google Scholar 

  5. Marshall HR, et al. Use of multi-spectral MR data to generate an attenuation map for application to PET/MR hybrid imaging. Proc Intl Soc Mag Reson Med 2009;17:4698.

    Google Scholar 

  6. Hofmann M, et al. MR-based attenuation correction for PET/MR. Proc Intl Soc Mag Reson Med 2009;17:260.

    Google Scholar 

  7. Martinez-Möller A, Souvatzoglou M, Delso G, Bundschuh RA, Chefd’hotel C, Ziegler SI, et al. Tissue classification as a potential approach for attenuation correction in whole-body PET/MRI: evaluation with PET/CT data. J Nucl Med 2009;50:520–6.

    Article  PubMed  Google Scholar 

  8. Hofmann M, Steinke F, Scheel V, Charpiat G, Farquhar J, Aschoff P, et al. MRI-based attenuation correction for PET/MR: a novel approach combining pattern recognition and atlas registration. J Nucl Med 2008;49:1875–83.

    Article  PubMed  Google Scholar 

  9. Hofmann M, Pichler B, Schölkopf B, Beyer T. Towards quantitative PET/MRI: a review of MR-based attenuation correction techniques. Eur J Nucl Med Mol Imaging 2009;36(Suppl 1):S93–104. doi:10.1007/s00259-008-1007-7.

    Article  PubMed  Google Scholar 

  10. Bai C, Shao L, Da Silva A, Zhao Z. A generalized model for the conversion from CT numbers to linear attenuation coefficients. IEEE Trans Nucl Sci 2003;50:1510–5.

    Article  Google Scholar 

  11. Zaidi H. Is MR-guided attenuation correction a viable option for dual-modality PET/MR imaging? Radiology 2007;244:639–42.

    Article  PubMed  Google Scholar 

  12. Zaidi H, Montandon ML, Slosman DO. Magnetic resonance imaging-guided attenuation and scatter corrections in three-dimensional brain positron emission tomography. Med Phys 2003;30(5):937–48.

    Article  PubMed  Google Scholar 

  13. Salomon A, Schulz V, Brinks R, Schweizer B, Goedicke A. Iterative generation of attenuation maps in TOF-PET/MR using consistency conditions. SNM’s 56th Annual Meeting, 13–17 June 2009.

  14. Wu TH, Huang YH, Lee JJ, Wang SY, Su CT, Chen LK, et al. Radiation exposure during transmission measurements: comparison between CT- and germanium-based techniques with a current PET scanner. Eur J Nucl Med Mol Imaging 2004;31:38–43.

    Article  PubMed  Google Scholar 

  15. Zaidi H. Is radionuclide transmission scanning obsolete for dual-modality PET/CT systems? Eur J Nucl Med Mol Imaging 2007;34:815–8.

    Article  PubMed  Google Scholar 

  16. Hu Z, Ojha N, Renisch S, Schulz V, Torres I, Buhl A, et al. MR-based attenuation correction for a whole-body sequential PET/MR system. IEEE Nucl Sci Symp Conf Rec 2009;M11–6.

  17. Sensakovic WF, Armato SG. Magnetic resonance imaging of the lung: automated segmentation methods. Methods of cancer diagnosis, therapy, and prognosis, Vol 2. Netherlands: Springer.

  18. Valk PE, Bailey DL, Townsend DW, Maisey MN. Positron emission tomography: basic science and clinical practice. London: Springer; 2004. 3rd printing.

    Google Scholar 

  19. Wiemker R, Pekar V. Fast computation of isosurface contour spectra for volume visualization. Proc Computer Assisted Radiology and Surgery 2001;1230:389–94.

    Google Scholar 

  20. Rueckert D, Sonoda LI, Hayes C, Hill DLG, Leach MO, Hawkes DJ. Nonrigid registration using free-form deformations: application to breast MR images. IEEE Trans Med Imaging 1999;18:712–21.

    Article  CAS  PubMed  Google Scholar 

  21. Wang W, Hu Z, Gualtieri EE, Parma MJ, Walsh ES, Sebok D, et al. Systematic and distributed time-of-flight list mode PET reconstruction. IEEE Nucl Sci Symp Conf Rec 2006;3:1715–22.

    Article  Google Scholar 

  22. Verschakelen JA, Van fraeyenhoven L, Laureys G, Demedts M, Baert AL. Differences in CT density between dependent and nondependent portions of the lung: influence of lung volume. AJR Am J Roentgenol 1993;161:713–7.

    CAS  PubMed  Google Scholar 

  23. Tawhai MH, Nash MP, Lin CL, Hoffman EA. Supine and prone differences in regional lung density and pleural pressure gradients in the human lung with constant shape. J Appl Physiol 2009;107:912–20.

    Article  PubMed  Google Scholar 

  24. Corder GW, Foreman DI. Nonparametric statistics for non-statisticians: a step-by-step approach. New Jersey: Wiley; 2009.

    Google Scholar 

  25. Keereman V, et al. Estimation of attenuation maps from UTE derived R2 image. Proc Intl Soc Mag Reson Med 2009;17:2774.

    Google Scholar 

  26. Robson MD, Bydder GM. Clinical ultrashort echo time imaging of bone and other connective tissues. NMR Biomed 2006;19:765–80.

    Article  PubMed  Google Scholar 

  27. Ma J, Costelloe CM, Madewell JE, Hortobagyi GN, Green MC, Cao G, et al. Fast dixon-based multisequence and multiplanar MRI for whole-body detection of cancer metastases. J Magn Reson Imaging 2009;29(5):1154–62.

    Article  PubMed  Google Scholar 

  28. Madsen MT. PET attenuation correction using mean attenuation coefficients: a simulation study. IEEE Trans Nucl Sci 1999;46(6):2172–6.

    Article  Google Scholar 

  29. Beyer T, Bockisch A, Kühl H, Martinez MJ. Whole-body 18F-FDG PET/CT in the presence of truncation artifacts. J Nucl Med 2006;47(1):91–9.

    PubMed  Google Scholar 

  30. Goerres GW, Ziegler SI, Burger C, Berthold T, Von Schulthess GK, Buck A. Artifacts at PET and PET/CT caused by metallic hip prosthetic material. Radiology 2003;226:577–84.

    Article  PubMed  Google Scholar 

  31. Berthelsen AK, Holm S, Loft A, Klausen TL, Andersen F, Højgaard L. PET/CT with intravenous contrast can be used for PET attenuation correction in cancer patients. Eur J Nucl Med Mol Imaging 2005;32:1167–75.

    Article  CAS  PubMed  Google Scholar 

Download references

Acknowledgment

This work was supported by the EU FP7 project HYPERImage (grant agreement 201651).

Conflicts of interest

The first seven authors are employees of Philips.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to V. Schulz.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Schulz, V., Torres-Espallardo, I., Renisch, S. et al. Automatic, three-segment, MR-based attenuation correction for whole-body PET/MR data. Eur J Nucl Med Mol Imaging 38, 138–152 (2011). https://doi.org/10.1007/s00259-010-1603-1

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s00259-010-1603-1

Keywords

Navigation