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The Diversity and Anti-Microbial Activity of Endophytic Actinomycetes Isolated from Medicinal Plants in Panxi Plateau, China

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Abstract

Traditional Chinese medicinal plants are sources of biologically active compounds, providing raw material for pharmaceutical, cosmetic and fragrance industries. The endophytes of medicinal plants participate in biochemical pathways and produce analogous or novel bioactive compounds. Panxi plateau in South-west Sichuan in China with its unique geographical and climatological characteristics is a habitat of a great variety of medicinal plants. In this study, 560 endophytic actinomycetes were isolated from 26 medicinal plant species in Panxi plateau. 60 isolates were selected for 16S rDNA-RFLP analysis and 14 representative strains were chosen for 16S rDNA sequencing. According to the phylogenetic analysis, seven isolates were Streptomyces sp., while the remainder belonged to genera Micromonospora, Oerskovia, Nonomuraea, Promicromonospora and Rhodococcus. Antimicrobial activity analysis combined with the results of amplifying genes coding for polyketide synthetase (PKS-I, PKS-II) and nonribosomal peptide synthetase (NRPS) showed that endophytic actinomycetes isolated from medicinal plants in Panxi plateau had broad-spectrum antimicrobial activity and potential natural product diversity, which further proved that endophytic actinomycetes are valuable reservoirs of novel bioactive compounds.

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References

  1. Araujo WL, Marcon J, Maccheroni WJ et al (2002) Diversity of endophytic bacterial populations and their interaction with Xylella fastidiosa in citrus plants. Appl Environ Microbiol 68:4906–4914

    Article  CAS  PubMed  Google Scholar 

  2. Bascom-Slack CA, Ma C, Moore E et al (2009) Multiple, novel biologically active endophytic actinomycetes isolated from upper Amazonian rainforests. Microb Ecol 58:374–383

    Article  PubMed  Google Scholar 

  3. Cao L, Qiu Z, You J et al (2004) Isolation and characterization of endophytic Streptomyces strains from surface-sterilized tomato (Lycopersicon esculentum) roots. Lett Appl Microbiol 39:425–430

    Article  CAS  PubMed  Google Scholar 

  4. Castillo UF, Strobel GA, Mullenberg K et al (2006) Munumbicins E-4 and E-5: novel broad-spectrum antibiotics from Streptomyces NRRL 3052. FEMS Microbiol Lett 255:296–300

    Article  CAS  PubMed  Google Scholar 

  5. Coombs JT, Franco CM (2003) Isolation and identification of actinobacteria from surface-sterilized wheat roots. Appl Environ Microbiol 69:5603–5608

    Article  CAS  PubMed  Google Scholar 

  6. Crawford DL, Lynch JM, Whipps JM et al (1993) Isolation and characterization of actinomycete antagonists of a fungal root pathogen. Appl Environ Microbiol 59:3899–3905

    CAS  PubMed  Google Scholar 

  7. Cui XL, Mao PH, Zeng M et al (2001) Streptimonospora salina gen nov., sp. nov., a new member of the family Nocardiopsaceae. Int J Syst Evol Microbiol 51:357–363

    CAS  PubMed  Google Scholar 

  8. El-Shatoury S, Abdulla H, El-Karaaly O et al (2006) Bioactivites of endophytic actinomycetes from selected medicinal plants in the world heritage site of saint Katherine, Egypt. Int J Bot 2:307–312

    Article  Google Scholar 

  9. Fiedler HP, Bruntner C, Riedlinger J et al (2008) Proximicin A, B and C, novel aminofuran antibiotic and anticancer compounds isolated from marine strains of the actinomycete Verrucosispora. J Antibiot (Tokyo) 61:158–163

    CAS  Google Scholar 

  10. Hou BC, Wang ET, Li Y et al (2009) Rhizobial resource associated with epidemic legumes in Tibet. Microb Ecol 57:69–81

    Article  PubMed  Google Scholar 

  11. Igarashia Y, Trujillob ME, Martínez-Molinab E et al (2007) Antitumor anthraquinones from an endophytic actinomycete Micromonospora lupini sp. nov. Bioorg Med Chem Lett 17:3702–3705

    Article  Google Scholar 

  12. Jiang SM, Li X, Zhang L et al (2008) Culturable actinobacteria isolated from marine sponge Iotrochota sp. Mar Biol 153:945–952

    Article  CAS  Google Scholar 

  13. Johannes H, Gabriele B, Barbara S (2006) Isolation procedures for endophytic microorganisms. Berlin, Springer, pp 299–305

    Google Scholar 

  14. Juan D, Gang F, Yi Z (2007) Current situation and outlook of development and use special biotic resources in Panxi region. Sci Technol Inf Panzh 32:8–11

    Google Scholar 

  15. Karthikeyan B, Jaleel CA, Lakshmanan GM et al (2008) Studies on rhizosphere microbial diversity of some commercially important medicinal plants. Colloids Surf B 62:143–145

    Article  CAS  Google Scholar 

  16. Kelly GT, Sharma V, Watanabe CM (2008) An improved method for culturing Streptomyces sahachiroi: biosynthetic origin of the enol fragment of azinomycin B. Bioorg Chem 36:4–15

    Article  CAS  PubMed  Google Scholar 

  17. Li J, Zhao GZ, Chen HH et al (2008) Antitumour and antimicrobial activities of endophytic streptomycetes from pharmaceutical plants in rainforest. Lett Appl Microbiol 47:574–580

    Article  CAS  PubMed  Google Scholar 

  18. Li Q, Zhang X, Zou L et al (2009) Horizontal gene transfer and recombination shape mesorhizobial populations in the gene center of the host plants Astragalus luteolus and Astragalus ernestii in Sichuan, China. FEMS Microbiol Ecol 70:71–79

    PubMed  Google Scholar 

  19. Matsuura E, Shimomura K, Ishimaru K (2000) Flavonoid and polyacetylene from Pratia nummularia. Nat Med 54:44

    Google Scholar 

  20. Minowa Y, Araki M, Kanehisa M (2007) Comprehensive analysis of distinctive polyketide and nonribosomal peptide structural motifs encoded in microbial genomes. J Mol Biol 368:1500–1617

    Article  CAS  PubMed  Google Scholar 

  21. Muscholl-Silberhorn A, Thiel V, Imhoff JF (2008) Abundance and bioactivity of cultured sponge-associated bacteria from the Mediterranean sea. Microb Ecol 55:94–106

    Article  PubMed  Google Scholar 

  22. Peng Y, Jiang Y, Duan S et al (2007) Selective isolation methods of rare actinomycetes. JYNS 29:86–89

    Google Scholar 

  23. Qin S, Li J, Chen HH et al (2009) Isolation, diversity, and antimicrobial activity of rare actinobacteria from medicinal plants of tropical rain forests in Xishuangbanna, China. Appl Environ Microbiol 75:6176–6186

    Article  CAS  PubMed  Google Scholar 

  24. Qiu D, Ruan J, Huang Y (2008) Selective isolation and rapid identification of members of the genus Micromonospora. Appl Environ Microbiol 74:5593–5597

    Article  CAS  PubMed  Google Scholar 

  25. Schirmer A, Gadkari R, Reeves CD et al (2005) Metagenomic analysis reveals diverse polyketide synthase gene clusters in microorganisms associated with the marine sponge Discodermia dissoluta. Appl Environ Microbiol 71:4840–4849

    Article  CAS  PubMed  Google Scholar 

  26. Schulz D, Nachtigall J, Riedlinger J et al (2009) Piceamycin and its N-acetylcysteine adduct is produced by Streptomyces sp. GB 4-2. J Antibiot (Tokyo) 62:513–518

    CAS  Google Scholar 

  27. Sheil D (1999) Tropical forest diversity, environmental change and species augmentation: after the intermediate disturbance hypothesis. J Veg Sci 10:851–860

    Article  Google Scholar 

  28. Stone JK, Charles WB, James FW (2000) An overview of endophytic microbes: endophytism defined. Dekker, New York, pp 3–5

    Google Scholar 

  29. Strobel GA (2003) Endophytes as sources of bioactive products. Microbes Infect 5:535–544

    Article  CAS  PubMed  Google Scholar 

  30. Strobel GA, Miller RV, Martinez-Miller C et al (1999) Cryptocandin, a potent antimycotic from the endophytic fungus Cryptosporiopsis cf quercina. Microbiology 145:1919–1926

    Article  CAS  PubMed  Google Scholar 

  31. Strobel G, Daisy B, Castillo U et al (2004) Natural products from endophytic microorganisms. J Nat Prod 67:257–268

    Article  CAS  PubMed  Google Scholar 

  32. Taechowisan T, Lu C, Shen Y et al (2005) Secondary metabolites from endophytic Streptomyces aureofaciens CMUAc130 and their antifungal activity. Microbiology 151:1691–1695

    Article  CAS  PubMed  Google Scholar 

  33. Tamura K, Dudley J, Nei M et al (2007) MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol Biol Evol 24:1596–1599

    Article  CAS  PubMed  Google Scholar 

  34. Thompson JD, Gibson TJ, Plewniak F et al (1997) The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25:4876–4882

    Article  CAS  PubMed  Google Scholar 

  35. Thongchai T, John FP, Saisamorn L (2003) Isolation of endophytic actinomycetes from selected plants and their antifungal activity. World J Microbiol Biotechnol 19:381–385

    Article  Google Scholar 

  36. Verma VC, Gond SK, Kumar A et al (2009) Endophytic actinomycetes from Azadirachta indica A. Juss.: isolation, diversity, and anti-microbial activity. Microb Ecol 57:749–756

    Article  PubMed  Google Scholar 

  37. Vickers JC, Williams ST, Ross GW (1984) A taxonomic approach to selective isolation of streptomycetes from soil. Academic Press, Orlando, pp 553–561

    Google Scholar 

  38. Wu CP, Lin QQ, Chen MY et al (2006) Studies on the chemical components and antibacterial activity of volatile oil of mosla dianthera maxim. J Fujian Norm Univ (Nat Sci Ed) 22:101–106

    Google Scholar 

  39. Xue PF, Gang L, Wen ZZ et al (2005) Secondary metabolites from Potentilla multifida L. (Rosaceae). Biochem Syst Ecol 33:725–728

    Article  CAS  Google Scholar 

  40. Yan XC (1992) Isolation and identification of actinomycete. Science Press, Beijing, pp 45–68

    Google Scholar 

  41. Yang GP, Qian JF (2009) Reviews of research on Arisaematis. Chin J Ethnomed Ethnopharm 18:19–21

    Google Scholar 

  42. Zhang HT, Zhang W, Jin Y et al (2008) A comparative study on the phylogenetic diversity of culturable actinobacteria isolated from five marine sponge species. Antonie Van Leeuwenhoek 93:241–248

    Article  CAS  PubMed  Google Scholar 

Download references

Acknowledgements

This research was supported by the foundation of National Science Program of China (Project no. 30570062) and the fund of Sichuan provincal science and technology international cooperative project. We sincerely acknowledge kindness support from the Key Laboratory of Protection and Utilization of Biological Resources, Tarim university and Key Laboratory of Marine Biogenetic Resources, The Third Institute of Oceanography, State Oceanic Administration, when our laboratory was damaged in 2008 Sichuan earthquake.

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Correspondence to Lili Zhang or Xiaoping Zhang.

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Zhao, K., Penttinen, P., Guan, T. et al. The Diversity and Anti-Microbial Activity of Endophytic Actinomycetes Isolated from Medicinal Plants in Panxi Plateau, China. Curr Microbiol 62, 182–190 (2011). https://doi.org/10.1007/s00284-010-9685-3

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