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The influence of halogen type on structural features of compounds containing α-halo-α,α-dinitroethyl moieties

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Chemistry of Heterocyclic Compounds Aims and scope

We report the synthesis, as well as the molecular and crystal structures of N-(2-halo-2,2-dinitroethyl)pyrrolidine-2,5-diones (Hal = F, Cl, Br). A combination of X-ray structural analysis and quantum chemistry calculations was used for comparative analysis of molecular packing in the crystals of the synthesized compounds. It was shown that the fluorinated derivative contained a shortened F···F halogen bond of the first type, and in the bromo derivative the bromine atoms formed a relatively strong Br···O=C halogen bond of the second type, while the chlorine atom in the structure of chloro derivative interacted with a nitro group oxygen atom, also forming a weak Cl···O2N halogen bond of the second type. These variations in the “preferences” of different halogen atoms resulted in observable differences in the crystal structures of the studied compounds.

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References

  1. (a) Shvekhgeimer, G. A.; Smirnyagin, V. A.; Sadykov, R. A.; Novikov, S. S. Russ. Chem. Rev. 1968, 37, 351. [Usp. Khim. 1968, 37, 816.] (b) Fridman, A. L.; Surkov, V. D.; Novikov, S. S. Russ. Chem. Rev. 1980, 49, 1068. [Usp. Khim. 1980, 49, 2159.]

  2. (a) Martynov, I. V.; Yurtanov, A. I. Russ. Chem. Rev. 1989, 58, 848. [Usp. Khim. 1989, 58, 1474.] (b) Kaberdin, R. V.; Potkin, V. I.; Zapol'skii, V. A. Russ. Chem. Rev. 1997, 66, 827. [Usp. Khim. 1997, 66, 919.] (с) Ibis, C.; Tuyun, A. F. Curr. Org. Synth. 2011, 8, 861.

  3. (a) Shvekhgeimer, M.-G. A. Russ. Chem. Rev. 1998, 67, 35. [Usp. Khim. 1998, 67, 39.] (b) Roca-Lopez, D.; Sadaba, D.; Delso, I.; Herrera, R. P.; Tejero, T.; Merino, P. Tetrahedron: Asymmetry 2010, 21, 2561.

  4. Allen, F. H. Acta Crystallogr., Sect. B: Struct. Sci. 2002, B58, 380.

    Article  CAS  Google Scholar 

  5. (a) Fedorov, B. S.; Golovina, N. I.; Barinova, L. S.; Arakcheeva, V. V.; Trofimova, R. F.; Atovmyan, L. O. Bull. Acad. Sci. USSR, Div. Chem Sci. 1991, 40, 2081. [Izv. Akad. Nauk SSSR, Ser. Khim. 1991, 2372.] (b) Fedorov, B. S.; Golovina, N. I.; Arakcheeva, V. V.; Barinova, L. S.; Trofimova, R. F.; Galkin, P. V.; Atovmyan, L. O. Bull. Acad. Sci. USSR, Div. Chem Sci. 1992, 41, 522. [Izv. Akad. Nauk SSSR, Ser. Khim. 1992, 664.]

  6. (a) Dalinger, I. L.; Vatsadze, I. A.; Shkineva, T. K.; Kormanov, A. V.; Struchkova, M. I.; Suponitsky, K. Yu.; Bragin, A. A.; Monogarov, K. A.; Sinditskii, V. P.; Sheremetev, A. B. Chem.–Asian J. 2015, 10, 1987. (b) Dalinger, I. L.; Shakhnes, A. Kh.; Monogarov, K. A.; Suponitsky, K. Yu.; Sheremetev, A. B. Mendeleev Commun. 2015, 25, 429. (c) Gidaspov, A. A.; Zalomlenkov, V. A.; Bakharev, V. V.; Parfenov, V. E.; Yurtaev, E. V.; Struchkova, M. I.; Palysaeva, N. V.; Suponitsky, K. Yu.; Lempert, D. B.; Sheremetev, A. B. RSC Adv. 2016, 6, 34921. (d) Sheremetev, A. B.; Korolev, V. L.; Potemkin, A. A.; Aleksandrova, N. S.; Palysaeva, N. V.; Hoang, T. H.; Sinditskii, V. P.; Suponitsky, K. Yu. Asian J. Org. Chem. 2016, 5, 1388. (e) Gidaspov, A. A.; Bakharev, V. V.; Suponitsky, K. Yu.; Nikitin, V. G.; Sheremetev, A. B. RSC Adv. 2016, 6, 104325.

  7. Bagal, L. I.; Koldobskii, G. I.; Gerasimova, Е. S. Zh. Org. Khim. 1969, 5, 1582.

    CAS  Google Scholar 

  8. (a) Tselinskii, I. V.; Mel'nikov, А. А.; Varyagina, L. G.; Trubitsin, А. Е. Zh. Org. Khim. 1985, 21, 2490. (b) Tselinskii, I. V.; Mel'nikov, А. А.; Trubitsin, А. Е. Zh. Org. Khim. 1990, 26, 272. (c) Trubitsin, А. Е.; Mel'nikov, А. А.; Tselinskii, I. V.; Popov, А. М. Zh. Org. Khim. 1990, 26, 2007. (d) Lukýanov, O. A.; Pokhvisneva, G. V.; Ternikova, T. V.; Shlykova, N. I.; Shagaeva, M. E. Russ. Chem. Bull., Int. Ed. 2011, 60, 1703. [Izv. Akad. Nauk, Ser. Khim. 2011, 1678.]

  9. (a) Tselinskii, I. V.; Shokhor, I. N.; Bagal, L. I. Zh. Org. Khim. 1994, 30, 983. (b) Gidaspov, A. A.; Bakharev, V. V.; Fedorov, B. S.; Fadeev, M. A.; Konovalova, N. P. Russ. J. Appl. Chem. 2009, 82, 1816. [Zh. Prikl. Khim. 2009, 82, 1664.] (c) Luk'yanov, O. A.; Parakhin, V. V. Russ. Chem. Bull., Int. Ed. 2012, 61, 1582. [Izv. Akad. Nauk, Ser. Khim. 2012, 1566.]

  10. (a) Andreev, L. M.; Perekalin, V. V.; Altukhov, K. V. Zh. Org. Khim. 1980, 16, 2445. (b) Gidaspov, A. A.; Bakharev, V. V.; Kachanovskaya, E. V.; Kosareva, E. A.; Galkina, M. V.; Ekimova, E. V.; Yakunina, N. G.; Bulychev, Yu. N. Pharm. Chem. J. 2004, 38, 411. [Khim.-Farm. Zh. 2004, 38(8), 9.] (c) Bakharev, V. V.; Gidaspov, A. A.; Golovin, E. V. Russ. J. Gen. Chem. 2007, 77, 1426. [Zh. Obshch. Khim. 2007, 77, 1349.]

  11. Frisch, M. J.; Trucks, G. W.; Schlegel, H. B.; Scuseria, G. E.; Robb, M. A.; Cheeseman, J. R.; Montgomery, J. A.; Kudin, K. N., Jr.; Burant, J. C.; Millam, J. M.; Iyengar, S. S.; Tomasi, J.; Barone, V.; Mennucci, B.; Cossi, M.; Scalmani, G.; Rega, N.; Petersson, G. A.; Nakatsuji, H.; Hada, M.; Ehara, M.; Toyota, K.; Fukuda, R.; Hasegawa, J.; Ishida, M.; Nakajima, T.; Honda, Y.; Kitao, O.; Nakai, H.; Klene, M.; Li, X.; Knox, J. E.; Hratchian, H. P.; Cross, J. B.; Bakken, V.; Adamo, C.; Jaramillo, J.; Gomperts, R.; Stratmann, R. E.; Yazyev, O.; Austin, A. J.; Cammi, R.; Pomelli, C.; Ochterski, J. W.; Ayala, P. Y.; Morokuma, K.; Voth, G. A.; Salvador, P.; Dannenberg, J. J.; Zakrzewski, V. G.; Dapprich, S.; Daniels, A. D.; Strain, M. C.; Farkas, O.; Malick, D. K.; Rabuck, A. D.; Raghavachari, K.; Foresman, J. B.; Ortiz, J. V.; Cui, Q.; Baboul, A. G.; Clifford, S.; Cioslowski, J.; Stefanov, B. B.; Liu, G.; Liashenko, A.; Piskorz, P.; Komaromi, I.; Martin, R. L.; Fox, D. J.; Keith, T.; Al-Laham, M. A.; Peng, C. Y.; Nanayakkara, A.; Challacombe, M.; Gill, P. M. W.; Johnson, B.; Chen, W.; Wong, M. W.; Gonzalez, C.; Pople, J. A. Gaussian 03, Revision E.01; Gaussian, Inc.: Wallingford, 2004.

    Google Scholar 

  12. (a) Suponitsky, K. Yu.; Lyssenko, K. A.; Antipin, M. Yu.; Aleksandrova, N. S.; Sheremetev, A. B.; Novikova, T. S. Russ. Chem. Bull., Int. Ed. 2009, 58, 2129. [Izv. Akad. Nauk, Ser. Khim. 2009, 2065.] (b) Suponitsky, K. Yu.; Lyssenko, K. A.; Ananyev, I. V.; Kozeev, A. M.; Sheremetev, A. B. Cryst. Growth Des. 2014, 14, 4439. (c) Sheremetev, A. B.; Yudin, I. L.; Palysaeva, N. V.; Suponitsky, K. Yu. J. Heterocycl. Chem. 2012, 49, 394. (d) Dalinger, I. L.; Vatsadze, I. A.; Shkineva, T. K.; Kormanov, A. V.; Kozeev, A. M.; Averkiev, B. B.; Dalinger, A. I.; Beklemishev, M. K.; Sheremetev, A. B. Chem. Heterocycl. Compd. 2015, 51, 545. [Khim. Geterotsikl. Soedin. 2015, 51, 545.]

  13. (a) Zhao, Y.; Truhlar, D. G. J. Chem. Theory Comput. 2007, 3, 289. (b) Šponer, J.; Riley, K. E.; Hobza, P. Phys. Chem. Chem. Phys. 2008, 10, 2595. (c) Suponitsky, K. Yu.; Masunov, A. E.; Antipin, M. Yu., Mendeleev. Commun. 2009, 19, 311.

  14. (a) Riley, K. E.; Murray, J. S.; Fanfrlík, J.; Rezáč, J.; Solá, R. J.; Concha, M. C.; Ramos, F. M.; Politzer, P. J. Mol. Model. 2011, 17, 3309. (b) Suponitsky, K. Yu.; Burakov, N. I.; Kanibolotsky, A. L.; Mikhailov, V. A. J. Phys. Chem. A. 2016, 120, 4179.

  15. (a) Klapötke, T. M.; Krumm, B.; Moll, R. Chem.–Eur. J. 2013, 19, 12113. (b) Kettner, M. A.; Karaghiosoff, K.; Klapötke, T. M.; Sućeska, M.; Wunder, S. Chem. – Eur. J. 2014, 20, 7622. (с) Vo, T. T.; Zhang, J.; Parrish, D. A.; Twamley, B.; Shreeve, J. M. J. Am. Chem. Soc. 2013, 135, 11787. (d) Tang, Y.; Gao, H.; Imler, G. H.; Parrish, D. A.; Shreeve, J. M. RSC Adv. 2016, 6, 91477. (e) Chaves, D. E.; Parrish, D. A.; Mitchell, L. Angew. Chem., Int. Ed. 2016, 55, 8666.

  16. (a) Bader, R. F. W. Atoms in Molecules. A Quantum Theory; Clarendon Press: Oxford, 1990. (b) Keith, T. A. AIMAll, Version 14.11.23; TK Gristmill Software: Overland Park, 2014.

  17. (a) Shishkin, O. V.; Dyakonenko, V. V.; Maleev, A. V. CrystEngComm 2012, 14, 1795. (b) Sheremetev, A. B.; Zabusov, S. G.; Tukhbatshin, T. R.; Palysaeva, N. V.; Suponitsky, K. Yu. Chem. Heterocycl. Compd. 2014, 50, 1154. [Khim. Geterotsikl. Soedin. 2014, 1250.] (c) Sheremetev, A. B.; Lyalin, B. V.; Kozeev, A. M.; Palysaeva, N. V.; Struchkova, M. I.; Suponitsky, K. Yu. RSC Adv. 2015, 5, 37617.

  18. Nayak, S. K.; Reddy, M. K.; Row, T. N. G.; Chopra, D. Cryst. Growth Des. 2011, 11, 1578.

    Article  CAS  Google Scholar 

  19. Bui, T. T. T.; Dahaoui, S.; Lecomte, C.; Desiraju, G. R.; Espinosa, E. Angew. Chem., Int. Ed. 2009, 48, 3838.

    Article  CAS  Google Scholar 

  20. (a) Klapötke, T. M.; Krumm, B.; Moll, R.; Rest, S. F.; Vishnevskiy, Yu. V.; Reuter, C.; Stammler, H.-G.; Mitzel, N. W. Chem.–Eur. J. 2014, 20, 12962. (b) Karnoukhova, V. A.; Fedyanin, I. V.; Lyssenko, K. A. Struct. Chem. 2016, 27, 17.

  21. (a) Nayak, S. K.; Terraneo, G.; Forni, A.; Metrangolo, P.; Resnati, G. CrystEngComm 2012, 14, 4259. (b) Jones, R. H.; Knight, K. S.; Marshall, W. G.; Coles, S. J.; Horton, P. N.; Pitak, M. B. CrystEngComm. 2013, 15, 8572.

  22. Destro, R.; Sartirana, E.; Loconte, L.; Soave, R.; Colombo, P.; Destro, C.; Presti, L. L. Cryst. Growth Des. 2013, 13, 4571.

    Article  CAS  Google Scholar 

  23. (a) Etter, M. C. Acc. Chem. Res. 1990, 23, 120. (b) Etter, M. C. J. Phys. Chem. 1991, 95, 4601.

  24. (a) Griffith, D. M.; Szőcs, B.; Keogh, T.; Suponitsky, K. Yu.; Farkas, E.; Buglyó, P.; Marmion, C. J. J. Inorg. Biochem. 2011, 105, 763. (b) Kosenko, I.; Lobanova, I.; Ananyev, I.; Laskova, J.; Semioshkin, A.; Bregadze, V. J. Organomet. Chem. 2016, 818, 58.

  25. Rowland, R. S.; Taylor, R. J. Phys. Chem. 1996, 100, 7384.

    Article  CAS  Google Scholar 

  26. Sheldrick, G. M. Acta Crystallogr., Sect. A: Found. Crystallogr. 2008, A64, 112.

    Article  Google Scholar 

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This work received financial support from the Russian Science Foundation (project RNF 16-13-10404).

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Correspondence to Kirill Yu. Suponitsky.

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The Supplementary information file containing data from quantum-chemical calculations and X-ray structural analysis of compounds 2–4 is available from the journal website at http://link.springer.com/journal/10593.

Translated from Khimiya Geterotsiklicheskikh Soedinenii, 2017, 53(5), 532–539

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Dmitrienko, A.O., Karnoukhova, V.A., Potemkin, A.A. et al. The influence of halogen type on structural features of compounds containing α-halo-α,α-dinitroethyl moieties. Chem Heterocycl Comp 53, 532–539 (2017). https://doi.org/10.1007/s10593-017-2088-7

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