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Assessment of wood degradation by Pycnoporus sanguineus when co-cultured with selected fungi

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Abstract

In this study the natural yeast populations on fruiting bodies of Pycnoporus sanguineus were characterized using restriction fragment length polymorphism (RFLP) analysis. The majority of the yeasts on these structures belonged to the ascomycetous species, Pichia guilliermondii while the rest were representatives of the basidiomycetous species Rhodotorula glutinis. The impact of these yeasts, as well as the pioneer fungus Aspergillus flavipes, on wood degradation by P. sanguineus was then determined by analyzing the major wood components after growth of co-cultures on Eucalyptus grandis wood chips. Standard protocols, commonly used by the paper and pulp industry, were employed to measure several parameters of the wood. Box plots were used for univariat descriptions of the data, while an analysis-of-distance (AOD) biplot revealed the multidimensional characteristics of the data. The results indicated that the yeasts had no effect on degradation of E. grandis wood chips by P. sanguineus, while the presence of A. flavipes impacted on the chemical composition of the residual wood chips.

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References

  • Bai F-Y, Zhao J-H, Takashima M, Jia J-H, Boekhout T, Nakase T (2002) Reclassification of the Sporobolomyces roseus and Sporidiobolus pararoseus complexes, with the description of Sporobolomyces phaffii sp nov. Int J Syst Evol Microbiol 52:2309–2314. doi:10.1099/ijs.0.02297-0

    Article  CAS  Google Scholar 

  • Blanchette RA, Shaw CG (1978) Associations among bacteria, yeasts, and basidiomycetes during wood decay. Phytopathology 68:631–637

    Article  Google Scholar 

  • Browning BL (1967) Methods of wood chemistry, vol II. Interscience Publications, New York, p 407

    Google Scholar 

  • Camatti-Sartori V, da Silva-Ribeiro RT, Valdebenito-Sanhueza RM, Pagnocca FC, Echeverrigaray S, Azevedo JL (2005) Endophytic yeasts and filamentous fungi associated with southern Brazilian apple (Malus domestica) orchards subjected to conventional, integrated, or organic cultivation. J Basic Microbiol 45:397–402

    Article  Google Scholar 

  • Chan-Yeung M, Kam K, Leung C, Wang J, Yew W, Lam C, Tam C (2006) Population-based prospective molecular and conventional epidemiological study of tuberculosis in Hong Kong. Respirology 11:442–448

    Article  Google Scholar 

  • de Almeida Siqueira EM, Mizuta K, Giglio JR (1997) Pycnoporus sanguineus: a novel source of α-amylase. Mycol Res 101:188–190

    Article  Google Scholar 

  • Dommisse EJ (1998) Fungal pretreatment of wood chips to enhance the alkaline pulping process. Phd. Thesis. Stellenbosch University, South Africa

  • Duarte JC, Costa-Ferreira M (1994) Aspergilli and lignocellulosics: enzymology and biotechnological applications. FEMS Microbiol Rev 13:377–386

    Article  CAS  Google Scholar 

  • Esteve-Zarzoso B, Belloch C, Uruburu F, Quero A (1999) Identification of yeasts by RFLP analysis of the 5.8S rRNA gene and the two ribosomal internal transcribed spacers. Int J Syst Bacteriol 49:329–337

    Article  CAS  Google Scholar 

  • Evans CS, Hedger JN (2001) Degradation of plant cell wall polymers. In: Gadd GM (ed) Fungi in bioremediation, Chap 1. Cambridge University Press, Cambridge, pp 1–20

    Google Scholar 

  • Everitt BS (1994) Exploring multivariate data graphically: a brief review with examples. J Appl Stat 21:63–93

    Article  Google Scholar 

  • Fell JW, Boekhout T, Fonseca A, Scorzetti G, Statzell-Tallman A (2000) Biodiversity and systematics of basidiomycetous yeasts as determined by large-subunit rDNA D1/D2 domain sequence analysis. Int J Syst Evol Microbiol 50:1351–1371

    CAS  Google Scholar 

  • Ferraz A, Esposito E, Bruns RE, Durán N (1998) The use of principal component analysis (PCA) for pattern recognition in Eucalyptus grandis wood biodegradation experiments. World J Microbiol Biotechnol 14:487–490

    Article  Google Scholar 

  • Fonseca Á, Inácio J (2006) Phylloplane yeasts. In: Rosa CA, Péter G (eds) The yeast handbook; Biodiversity and ecophysiology of yeasts, Chap 13. Springer-Verlag, Berlin, Heidelberg, pp 263–301

    Chapter  Google Scholar 

  • Ganter PF (2006) Yeast and invertebrate associations. In: Rosa CA, Péter G (eds) The yeast handbook; Biodiversity and ecophysiology of yeasts, Chap 14. Springer-Verlag, Berlin, Heidelberg, pp 303–370

    Chapter  Google Scholar 

  • Garcia RA, Cloutier A, Riedl B (2006) Dimensional stability of MDF panels produced from heat-treated fibres. Holzforschung 60:278–284

    Article  CAS  Google Scholar 

  • Good P (2000) Permutation tests: a practical guide to resampling methods for testing hypotheses, 2nd edn. Springer-Verlag, Berlin

    Google Scholar 

  • Gower JC, Hand DJ (1996) Biplots. Chapman and Hall, New York

    Google Scholar 

  • Gower JC, Krzanowski WJ (1999) Analysis of distance for structured multivariate data and extensions to multivariate analysis of variance. Appl Stat 48:505–519

    Google Scholar 

  • Guillamón JM, Sabaté J, Barrio E, Cano J, Querol A (1998) Rapid identification of wine yeast species based on RFLP analysis of the ribosomal internal transcribed spacer (ITS) region. Arch Microbiol 169:387–392

    Article  Google Scholar 

  • Gutiérrez A, Del Río JC, Martínez MJ, Martínez AT (1999) Fungal degradation of lipophilic extractives in Eucalyptus globules wood. Appl Environ Microbiol 65:1367–1371

    Google Scholar 

  • Gutiérrez A, Del Río JC, Martínez-Íñigo MJ, Martínez MJ, Martínez AT (2002) Production of new unsaturated lipids during wood decay by ligninolytic basidiomycetes. Appl Environ Microbiol 68:1344–1350

    Article  CAS  Google Scholar 

  • Harrigan WF, McCance ME (1967) Laboratory methods in food and dairy microbiology. Academic Press, London

    Google Scholar 

  • Hatfield R, Fukushima R (2005) Can lignin be accurately measured? Crop Sci 45:832–839

    Article  CAS  Google Scholar 

  • Hoffman CS, Winston F (1987) A ten-minute DNA preparation from yeast efficiently releases autonomous plasmids for transformation of Eschericia coli. Gene 57:267–272

    Article  CAS  Google Scholar 

  • Kirk TK, Cullen D (1998) Enzymology and molecular genetics of wood degradation by white-rot fungi. In: Young RA, Akhtar M (eds) Environmentally friendly technologies for the pulp and paper industry, Chap 9. Wiley, New York, pp 273–307

    Google Scholar 

  • Knutzon DS, Thurmond JM, Huang Y-S, Chaudharys S, Bobik EG, Chan GM, Kirchner SJ, Mukerji P (1998) Identification of Δ5-desaturase from Mortierella alpine by heterologous expression in bakers’ yeast and canola. J Biol Chem 45:29360–29366

    Article  Google Scholar 

  • Kurtzman CP, Fell JW (1998) The yeasts a taxonomic study, 4th edn. Elsevier, Amsterdam

    Google Scholar 

  • Laitila A, Wilhelmson A, Kotaviita E, Olkku J, Home S, Juvonen R (2006) Yeasts in an industrial malting ecosystem. J Ind Microbiol Biotechnol 33:953–966

    Article  CAS  Google Scholar 

  • Llorens A, Hinojo MJ, Mateo R, Medina A, Valle-Algarra FM, González-Jaén MT, Jiménez M (2006) Variability and characterization of mycotoxin-producing Fusarium isolates by PCR-RFLP analysis of the IGS-rDNA region. Antonie Van Leeuwenhoek 89:465–478

    Article  CAS  Google Scholar 

  • Luna ML, Murace MA, Keil GD, Otaño ME (2004) Patterns of decay caused by Pycnoporus sanguineus and Ganoderma lucidum (Aphyllophorales) in poplar wood. IAWA J 25:425–433

    Google Scholar 

  • Martin ME, Aber JD (1996) High spectral resolution remote sensing of forest canopy lignin, nitrogen, and ecosystem processes. Ecol Appl 7:431–443

    Article  Google Scholar 

  • McGill R, Tukey JW, Larsen WA (1978) Variations of box plots. Am Stat 32:12–16

    Article  Google Scholar 

  • Nassar AH, El-Tarabily KA, Sivasithamparam K (2005) Promotion of plant growth by an auxin-producing isolate of the yeast Williopsis saturnus endophytic in maize (Zea mays L.) roots. Biol Fertil Soils 42:97–108

    Article  CAS  Google Scholar 

  • Nuopponen M, Vuorinen T, Jämsä S, Viitaniemi P (2004) Thermal modifications in softwood studied by FT-IR and UV resonance raman spectroscopies. J Wood Chem Technol 24:13–26

    Article  CAS  Google Scholar 

  • Raper KB, Fennel DI (1965) The genus Aspergillus. The Williams & Wilkins Company, Baltimore

    Google Scholar 

  • Ratledge C, Wilkinson SG (1988) Microbial lipids, vol L. Academic Press Ltd., England

    Google Scholar 

  • Rowell R, Lange S, McSweeny J, Davis M (2002) Modification of wood fiber using steam. In: Proceedings of the 6th pacific rim bio-based composites symposium & workshop on the chemical modification of cellulosics, Portland, Oregon, USA, pp 606–615

  • Scheffé H (1959) The analysis of variance. Wiley, New York

    Google Scholar 

  • Schwarze FWMR, Engels J, Mattheck C (2000) Fungal strategies of wood decay in trees. Springer-Verlag, Berlin Heidelberg

    Google Scholar 

  • Suh S, Blackwell M (2004) Three new beetle-associated yeast species in the Pichia guilliermondii clade. FEMS Yeast Res 5:87–95

    Article  CAS  Google Scholar 

  • TAPPI Test Method no. T222 om-88 (1992–1993) Acid-insoluble lignin in wood and pulp. Numerical index of TAPPI standards and provisional methods. Technical Association of Pulp and Paper Industry, Atlanta, Georgia, USA

  • TAPPI Test Method no. T264 om-88 (1992–1993) Preparation of wood for chemical analysis. Numerical index of TAPPI standards and provisional methods. Technical Association of Pulp and Paper Industry, Atlanta, Georgia, USA

  • Van der Westhuizen GCA, Eicker A (1994) Mushrooms of Southern Africa. Struik Publishers (Pty), Cape Town

    Google Scholar 

  • Weiland JJ, Guyonnet R (2003) Study of chemical modifications and fungi degradation of thermally modified wood using DRIFT spectroscopy. Holz Roh Werkst 61:216–220

    CAS  Google Scholar 

  • White TJ, Bruns T, Lee S, Taylor J (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innes MA, Gelfand DH, Sninsky JJ, White TJ (eds) PCR protocols. Academic Press, San Diego, pp 315–322

    Google Scholar 

  • Williams RS (2005) Weathering of wood. In: Rowell R (ed) Handbook of wood chemistry and wood composites. CRC Press, Boca Raton, pp 139–185

    Google Scholar 

  • Wolfaardt F, Taljaard JL, Jacobs A, Male JR, Rabie CJ (2004) Assessment of wood-inhabiting basidiomycetes for biokraft pulping of softwood chips. Bioresour Technol 95:25–30

    Article  CAS  Google Scholar 

  • Zacchi L, Vaughan-Martini A (2002) Yeasts associated with insects in agricultural areas of Perugia, Italy. Ann Microbiol 52:237–244

    Google Scholar 

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Correspondence to Alfred Botha.

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van Heerden, A., le Roux, N.J., Swart, J. et al. Assessment of wood degradation by Pycnoporus sanguineus when co-cultured with selected fungi. World J Microbiol Biotechnol 24, 2489–2497 (2008). https://doi.org/10.1007/s11274-008-9773-8

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  • DOI: https://doi.org/10.1007/s11274-008-9773-8

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