Skip to main content
Log in

Genetic diversity revealed by morphological traits and ISSR markers in 48 Okras (Abelmoschus escullentus L.)

  • Research Article
  • Published:
Physiology and Molecular Biology of Plants Aims and scope Submit manuscript

Abstract

Okra is a widely distributed crop in the tropics, subtropics, and warmer areas of the temperate zones. Its major potential uses as a vegetable, oil and protein source, and source of paper pulp and fuel, or biomass are compatible. It is expected to have high value of exploitation and application. Due to the limited number of molecular studies focused on okras, the methods of morphological and ISSR markers were used to analysis the genetic diversity of 48 okras in the present study. The 22 primers were picked for ISSR-PCR, and a total of 154 fragments were amplified with an overall average polymorphism of 54.55 %. We used the 154 markers to construct the dendrogram based on the unweighted pair group method with arithmetic means (UPGMA). A high level of genetic diversity was found among 48 individuals. The 48 Okras was divided into four clusters at Dice’s coefficient of 0.19 with clustering analysis. Based on these data of the genetic diversity, it will be possible to exploit the available resources of okra in more valuable ways.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3
Fig. 4
Fig. 5
Fig. 6

Similar content being viewed by others

References

  • Babaei N, Abdullah NA, Saleh G, Abdullah TL (2012) Isolation and characterization of microsatellite markers and analysis of genetic variability in Curculigo latifolia Dryand. Mol Biol Rep 39(11):9869–9877

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  • Bertoni BW, de C Telles MP, Malosso MG, Torres SC, Pereira JO, Lourenço MV, de C França S, Pereira AM (2010) Genetic diversity in natural populations of Jacaranda decurrens Cham. determined using RAPD and AFLP markers. Genet Mol Biol 33(3):532–538

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  • Dhall RK, Sharma SR, Mahajan BV (2014) Development of post-harvest protocol of okra for export marketing. J Food Sci Technol 51(8):1622–1625

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  • Earl DA, vonHoldt BM (2012) STRUCTURE HARVESTER: a website and program for visualizing STRUCTURE output and implementing the Evanno method. Conserv Genet Resour 4:359–361

    Article  Google Scholar 

  • Gul MZ, Bhakshu LM, Ahmad F, Kondapi AK, Qureshi IA, Ghazi IA (2011) Evaluation of Abelmoschus moschatus extracts for antioxidant, free radical scavenging, antimicrobial and antiproliferative activities using in vitro assays. BMC Complement Altern Med 11:64

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  • Ibeawuchi IK (2007) Intercropping a food production strategy for resource poor farmers. Nat Sci 5(1):46–49

    Google Scholar 

  • Nei M, Li WH (1979) Mathematical model for studying genetic variation in terms of restriction endonucleases. Proc Natl Acad Sci U S A 76:5269–5273

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  • Oyelade OJ, Ade-Omowaye BIO, Adeomi VF (2003) Influence of variety on protein, fat contents and some physical characteristics of okra seeds. J Food Eng 57:111–114

    Article  Google Scholar 

  • Pritchard JK, Stephens M, Donnelly P (2000) Inference of population structure using multilocus genotype data. Genetics 155:945–959

    CAS  PubMed Central  PubMed  Google Scholar 

  • Rohlf FG (2000) NTSYS-pc: numerical taxonomy and multivariate analysis system Version 2.1. Exeter Publications, New York

    Google Scholar 

  • Sethy NK, Shokeen B, Edwards KJ, Bhatia S (2006) Development of microsatellite markers and analysis of intraspecific genetic variability in chickpea (Cicer arietinum L.). Theor Appl Genet 112:1416–1428

    Article  CAS  PubMed  Google Scholar 

  • Shamsul A, Arifuzzaman K (2007) Chemical analysis of okra bast fiber (Abelmoschus esculentus) and its physico-chemical properties. J Text Appar Technol Manag 5(4):1–9

    Google Scholar 

  • Yuennan P, Sajjaanantakul T, Goff HD (2014) Effect of okra cell wall and polysaccharide on physical properties and stability of ice cream. J Food Sci 42:1750–1781

    Google Scholar 

Download references

Acknowledgments

This research was supported by grants from the National Natural Science Foundation of China (31071076), Changsha Science and Technology Funds (2014 to X. Guo), International S&T Cooperation Program of Hunan Province (2014WK3012 to J. Ye; 2015WK to X. Guo), the interdisciplinary research project of Hunan University (2015 to X. Guo), the Ph.D. Programs Foundation of Ministry of Education of China (20130161110005), Jiangxi Province Science and Technology Support Project (20133BBF60080), and the SIT Project of Hunan University, 2013 and 2014.

Author information

Authors and Affiliations

Authors

Corresponding authors

Correspondence to Jia-Zhuo Ye or Xin-Hong Guo.

Additional information

Cong-Ying Yuan and Ping Wang contributed equally to this work.

Electronic supplementary material

Below is the link to the electronic supplementary material.

Table S1

(DOC 163 kb)

Table S2

(DOC 45 kb)

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Yuan, CY., Wang, P., Chen, PP. et al. Genetic diversity revealed by morphological traits and ISSR markers in 48 Okras (Abelmoschus escullentus L.). Physiol Mol Biol Plants 21, 359–364 (2015). https://doi.org/10.1007/s12298-015-0303-5

Download citation

  • Received:

  • Revised:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s12298-015-0303-5

Keywords

Navigation