Skip to main content

Advertisement

Log in

Synthesis and antiviral study of novel 4-(2-(6-amino-4-oxo-4,5-dihydro-1H-pyrrolo[2,3-d]pyrimidin-3-yl)ethyl)benzamide derivatives

  • Original Research
  • Published:
Medicinal Chemistry Research Aims and scope Submit manuscript

Abstract

A series of ten new compounds (7a–j) has been synthesized by absolutely replacing the glutamic acid part of Pemetrexed drug, chemically known as N-{4-[2-(2-amino-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidin-5-yl)ethyl]benzoyl}-l-glutamic acid, with primary, secondary, and aryl amines in high yields using diethylphosphorocyanidate (DEPC) as a peptide coupling agent. All the synthesized compounds are characterized by 1H and 13C NMR, LCMS, and FT-IR spectral techniques. All the synthesized novel non-glutamate 4-(2-(6-amino-4-oxo-4,5-dihydro-1H-pyrrolo[2,3-d]pyrimidin-3-yl)ethyl)benzamide derivatives showed 4- to 7-folds higher antiviral activity than its structurally similar commercial drug Pemetrexed against Newcastle disease virus, an avian paramyxovirus. Among the lot, compounds possessing carboxamide synthesized using five-membered heteroaryl amines (7i and 7j) exhibited the highest antiviral activity.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Scheme 1
Fig. 2

Similar content being viewed by others

References

  • Adjei AA (2004) Pharmacology and mechanism of action of pemetrexed. Clin Lung Cancer 5(2):51–55

    Article  Google Scholar 

  • Asukai Y, Valladares A, Camps C, Wood E, Taipale K, ArellanoJ, Cassinello A, Sacristán JA, Dilla T (2010) Cost-effectiveness analysis of pemetrexed versus docetaxel in the second-line treatment of non-small cell lung cancer in Spain: results for the non-squamous histology population. BMC Cancer 10(26):1–14

    Google Scholar 

  • Barnett CJ, Wilson TM, Kobierski ME (1999) A practical synthesis of multitargeted antifolate LY231514. Org Process Res Dev 3(3):184–188

    Article  CAS  Google Scholar 

  • Berman EM, Werbel LM (1991) The renewed potential for folate antagonists in contemporary cancer chemotherapy. J Med Chem 34(2):479–485

    Article  CAS  Google Scholar 

  • Denis G, Nicole T (1986) Use of MTT colorimetric assay to measure cell activation. J Immunol Methods 94(2):57–63

    Google Scholar 

  • Erik DC, Jan B, Danuta M, Fritz H, Robins MJ (1987) Nucleic acid related compounds. 51. Synthesis and biological properties of sugar-modified analogs of the nucleoside antibiotics tubercidin, toyocamycin, sangivamycin, and formycin. J Med Chem 30(3):481–486

    Article  Google Scholar 

  • Guo X, Li Y, Tao L, Wang Q, Wang S, Hu W, Pan Z, Yang Q, Cui Y, Ge Z, Dong L, Yu X, An H, Song C, Chang J (2011) Synthesis and anti-HIV-1 activity of 4-substituted-7-(2′-deoxy-2′-fluoro-4′-azido-β-d-ribofuranosyl)pyrrolo[2,3-d]pyrimidine analogues. Bioorg Med ChemLett 21(22):6770–6772

    Article  CAS  Google Scholar 

  • Hilmy KMH, Khalifa MMA, Hawata MAA, Keshk RMA, El-Torgman AA (2010) Synthesis of new pyrrolo [2, 3-d] pyrimidine derivatives as antibacterial and antifungal agents. Eur J Med Chem 45(11):5243–5250

    Article  Google Scholar 

  • Itoh F, Yoshioka Y, Yukishige K, Yoshida S, Ootsu k, Akimoto H (2000) Non-glutamate type pyrrolo [2, 3-d] pyrimidine Antifolates. III. Synthesis and biological properties of nω-masked ornithine analogs. Chem Pharm Bull 48(9):1270–1280

    Article  CAS  Google Scholar 

  • Itoh F, Yoshioka Y, Yukishige K, Yoshida S, Wajima M, Ootsu K, Akimoto H (1996) Non-glutamate type pyrrolo[2, 3-d]pyrimidine antifolates. II. Synthesis and antitumor activity of N5-substituted glutamine analogs. ChemPharm Bull 44(8):1498–1509

    CAS  Google Scholar 

  • Itoh F, Yukishige K, Wajima M, Ootsu K, Akimoto H (1995) Non-glutamate type pyrrolo[2,3-d]pyrimidine antifolates. I: Synthesis and biological properties of pyrrolo[2,3-d]pyrimidine antifolates containing tetrazole congener of glutamic acid. Chem Pharm Bull 43(2):230–235

    Article  CAS  Google Scholar 

  • Jung MH, Kim H, Choi WK, El-Gamal MI, Park JH, Yoo KH, Sim TB, Lee SH, Baek D, HahJM, Cho JH, Oh CH (2009) Synthesis of pyrrolo[2,3-d] pyrimidine derivatives and their antiproliferative activity against melanoma cell line. Bioorg Med Chem Lett 19(23):6538–6543

    Article  CAS  Google Scholar 

  • Leroy BT, John CD (2000) Pyrrolo [2,3-d]pyrimidines as antiviral agents. Patent WO/2000/042043

  • Marcos LS, Eric AM, Lilia MB, Stuart R, Margaret T (1996) The antiinfluenza activity of pyrrolo[2,3-d]pyrimidines. Bioorg Med Chem Lett 6(5):565–568

    Article  Google Scholar 

  • McHardy T, Caldwell JJ, Cheung KM, Hunter LJ, Taylor K, Rowlands M, Ruddle R, Henley A, de-HavenBrandon A, Valenti M, Davies TG, Fazal L, Seavers L, Raynaud FI, Eccles SA, Aherne GW, Garrett MD, Collins I (2010) Discovery of 4-amino-1-(7H-pyrrolo[2,3-d]pyrimidin-4-yl)piperidine-4-carboxamides As selective, orally active inhibitors of protein kinase B (Akt). J Med Chem 53(5):2239–2249

    Article  CAS  Google Scholar 

  • Mohamed MS, Rashad AE, Adbel-onem M, Fatahalla SS (2007) New Anti-Inflammatory Agents. Z Naturforsch C 62:27–31

    Article  CAS  Google Scholar 

  • Nagashima S, Hondo T, Nagata H, Ogiyama T, Maeda J, Hoshii H, Kontani T, Kuromitsu S, Ohga K, Orita M, Ohno K, Moritomo A, Shiozuka K, Furutani M, Takeuchi M, Ohta M, Tsukamoto S (2009) Novel 7H-pyrrolo[2,3-d]pyrimidine derivatives as potent and orally active STAT6 inhibitors. Bioorg Med Chem 17(19):6926–6936

    Article  CAS  Google Scholar 

  • Pranab KG, Sylvia D, Reza NM, Linda WL, John DC, Leroy TB (1989) Synthesis, cytotoxicity, and antiviral activity of some acyclic analogs of the pyrrolo[2,3-d]pyrimidine nucleoside antibiotics tubercidin, toyocamycin, and sangivamycin. J Med Chem 32(2):402–408

    Article  Google Scholar 

  • Selvakumar B, Elango KP (2017) Synthesis of non-glutamate-type pyrrolo[2,3-d]pyrimidines via direct aminocarbonylation of aryl halides using solid Co2(CO)8 as a CO source and their antibacterial activity. J Chem Res 41:230–234

    Article  CAS  Google Scholar 

  • Shohreh M, Falcon-Perez JM, González E, Millet O, Mato JM, Farzad K (2012) Synthesis, dihydrofolatereductase inhibition, anti-proliferative testing, and saturation transfer difference 1H-NMR study of some new 2-substituted-4,6-diaminopyrimidine derivatives. Chem Pharm Bull 60(1):70–78

    Article  Google Scholar 

  • Supuran CT, Scozzafava A, Jurca BC, Iiies MA (1998) Carbonic anhydrase inhibitors - Part 49: Synthesis of substituted ureido and thioureido derivatives of aromatic/heterocyclic sulfonamides with increased affinities for isozymeI. Eur J Med Chem 33(2):83–93

    Article  CAS  Google Scholar 

  • Suster DC, Tarnauceanu E, Ionescu D, Dobre V, Niculescu-Duvaz I (1978) Potential anticancer agents. 16. Methotrexate analogs with a modified peptide side chain. J Med Chem 21(11):1162–1165

    Article  CAS  Google Scholar 

  • Varaprasad CV, Ramasamy KS, Girardet JL, Gunic E, Lai V, Zhong W, An H, Hong Z (2007) Synthesis of pyrrolo[2,3-d]pyrimidine nucleoside derivatives as potential anti-HCV agents. Bioorg Chem 35(1):25–34

    Article  CAS  Google Scholar 

Download references

Acknowledgements

We are thankful to the Management, Anthem Biosciences, Bangalore, India, for their invaluable support and allocation of resources for this work. We would like to thank the Analytical Chemistry team of Anthem Biosciences for carrying out all the analytical work.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Kuppanagounder P. Elango.

Ethics declarations

Conflict of interest

The authors declare that they have no conflict of interest.

Electronic supplementary material

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Balaraman, S., Nayak, N., Subbiah, M. et al. Synthesis and antiviral study of novel 4-(2-(6-amino-4-oxo-4,5-dihydro-1H-pyrrolo[2,3-d]pyrimidin-3-yl)ethyl)benzamide derivatives. Med Chem Res 27, 2538–2546 (2018). https://doi.org/10.1007/s00044-018-2256-z

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s00044-018-2256-z

Keywords

Navigation