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New in-capillary electrophoretic kinase assays to evaluate inhibitors of the PI3k/Akt/mTOR signaling pathway

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Abstract

Human kinases are one of the most promising targets for cancer therapy. Methods able to measure the effects of drugs on these cell agents remain crucial for biologists and medicinal chemists. The current work therefore sought to develop an in-capillary enzymatic assay based on capillary electrophoresis (CE) to evaluate the inhibition of phosphatidylinositol-3-kinase (PI3K), protein kinase B (Akt), and the mammalian target of rapamycin (mTOR). These kinases belong to the same signaling pathway PI3K/Akt/mTOR. For this proposal, the capillary was used as a nanoreactor in which a few nanoliters of the kinase, its substrate, adenosine triphosphate (ATP), and the potent inhibitor were separately injected. A transverse diffusion of laminar flow profiles (TDLFP) approach was employed to mix the reactants. Adenosine diphosphate (ADP ) was detected online at 254 nm. The CE assay was first developed on the α isoform of PI3K. It was compared to five commercial kits frequently used to assess kinase inhibition, based on time-resolved fluorescence resonance energy transfer (TR-FRET) and bioluminescence. Each assay was evaluated in terms of sensitivity (S/B), reproducibility (Z′), and variability (r 2). This CE method was easily extended to assay the inhibition of the β, γ, and δ isoforms of PI3K, and of the other kinases of the pathway, Akt1 and mTOR, since it is based on in-capillary mixing by TDLFP and on ADP quantification by simple UV absorption. This work shows for the first time the evaluation of inhibitors of the kinases of the PI3K/Akt/mTOR pathway using a common in-capillary CE assay. Several inhibitors with a wide range of affinity toward these enzymes were tested.

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References

  1. Hirsch E, Katanaev VL, Garlanda C, Azzolino O, Pirola L, Silengo L, Sozzani S, Mantovani A, Altruda F, Wymann MP (2000) Science 287:1049–1053

    Article  CAS  Google Scholar 

  2. Jackson SP, Schoenwaelder SM, Goncalves I, Nesbitt WS, Yap CL, Wright CE, Kenche V, Anderson KE, Dopheide SM, Yuan Y, Sturgeon SA, Prabaharan H, Thompson PE, Smith GD, Shepherd PR, Daniele N, Kulkarni S, Abbott B, Saylik D, Jones C, Lu L, Giuliano S, Hughan SC, Angus JA, Robertson AD, Salem HH (2005) Nat Med 11:507–514

    Article  CAS  Google Scholar 

  3. Ali K, Bilancio A, Thomas M, Pearce W, Gilfillan AM, Tkaczyk C, Kuehn N, Gray A, Giddings J, Peskett E, Fox R, Bruce I, Walker C, Sawyer C, Okkenhaug K, Finan P, Vanhaesebroeck B (2004) Nature 431:1007–1011

    Article  CAS  Google Scholar 

  4. Bagci-Onder T, Wakimoto H, Anderegg M, Cameron C, Shah K (2011) Cancer Res 71:154–163

    Article  CAS  Google Scholar 

  5. Zhou Q, Lui VWY, Yeo W (2011) Future Oncol 7:1149–1167

    Article  CAS  Google Scholar 

  6. Krylova SM, Okhonin V, Evenhuis CJ, Krylov SN (2009) Trends Anal Chem 28:987–1010

    Article  CAS  Google Scholar 

  7. Nehmé H, Nehmé R, Lafite P, Routier S, Morin P (2012) Anal Chim Acta 722:127–135

    Article  Google Scholar 

  8. Hai X, Yang B-f, Van Schepdael A (2012) Electrophoresis 33:211–227

    Article  CAS  Google Scholar 

  9. Suresh Babu CV, Cho SG, Yoo YS (2005) Electrophoresis 26:3765–3772

    Article  CAS  Google Scholar 

  10. Nehmé H, Nehmé R, Lafite P, Duverger E, Routier S, Morin P (2013) Anal Bioanal Chem 405:9159–9167

    Article  Google Scholar 

  11. Nehmé H, Nehmé R, Lafite P, Routier S, Morin P (2013) J Sep Sci 36:2151–2157

    Article  Google Scholar 

  12. Nehmé H, Nehmé R, Lafite P, Routier S, Morin P (2013) J Chromatogr A 1314:298–305

    Article  Google Scholar 

  13. Nehmé R, Nehmé H, Roux G, Destandau E, Claude B, Morin P (2013) J Chromatogr A 1318:257–264

    Article  Google Scholar 

  14. Yoon S, Ban E, Yoo YS (2002) J Chromatogr A 976:87–93

    Article  CAS  Google Scholar 

  15. Nam H-S, Ban E, Yoo E, Yoo YS (2002) J Chromatogr A 976:79–85

    Article  CAS  Google Scholar 

  16. Huang W, Jiang D, Wang X, Wang K, Sims CE, Allbritton NL, Zhang Q (2011) Anal Bioanal Chem 401:1881–1888

    Article  CAS  Google Scholar 

  17. Jiang D, Sims CE, Allbritton NL (2011) Faraday Disc 149:187–200

    Article  CAS  Google Scholar 

  18. Patel V, Lahusen T, Sy T, Sausville EA, Gutkind JS, Senderowicz AM (2002) Cancer Res 62:1401–1409

    CAS  Google Scholar 

  19. Rhodes N, Heerding DA, Duckett DR, Eberwein DJ, Knick VB, Lansing TJ, McConnell RT, Gilmer TM, Zhang S-Y, Robell K, Kahana JA, Geske RS, Kleymenova EV, Choudhry AE, Lai Z, Leber JD, Minthorn EA, Strum SL, Wood ER, Huang PS, Copeland RA, Kumar R (2008) Cancer Res 68:2366–2374

    Article  CAS  Google Scholar 

  20. Saurat T (2012) Synthèse d'inhibiteurs pyridopyrimidiniques de la voie PI3k/Akt/mTOR et mise au point des tests enzymatiques dans l'évaluation de leurs activités inhibitrices. Université d'Orléans, Orléans

    Google Scholar 

  21. www.invitrogen.com

  22. Yan L. AACR Annual Meeting 2009: Abstract number: DDT01-1

  23. Knight ZA, Gonzalez B, Feldman ME, Zunder ER, Goldenberg DD, Williams O, Loewith R, Stokoe D, Balla A, Toth B, Balla T, Weiss WA, Williams RL, Shokat KM (2006) Cell 125:733–747

    Article  CAS  Google Scholar 

  24. Yano H, Nakanishi S, Kimura K, Hanai N, Saitoh Y, Fukui Y, Nonomura Y, Matsuda Y (1993) J Biol Chem 268:25846–25856

    CAS  Google Scholar 

  25. Chaussade C, Rewcastle GW, Kendall JD, Denny WA, Cho K, Grønning LM, Chong ML, Anagnostou SH, Jackson SP, Daniele N, Shepherd PR (2007) Biochem J 404:449–458

    Article  CAS  Google Scholar 

  26. http://pubchem.ncbi.nlm.nih.gov/assay

  27. Maira S-M, Stauffer F, Brueggen J, Furet P, Schnell C, Fritsch C, Brachmann S, Chène P, De Pover A, Schoemaker K, Fabbro D, Gabriel D, Simonen M, Murphy L, Finan P, Sellers W, García-Echeverría C (2008) Mol Cancer Ther 7:1851–1863

    Article  CAS  Google Scholar 

  28. Mercado N, To Y, Ito K, Barnes PJ (2011) J Pharmacol Exp Ther 337:465–470

    Article  CAS  Google Scholar 

  29. Klink T, Kleman-Leyer K, Kopp A, Westermeyer T, Lowery R (2008) J Biomol Screen 13:476–485

    Article  CAS  Google Scholar 

  30. Stankewicz C, Rininsland FH (2006) J Biomol Screen 11:413–422

    Article  CAS  Google Scholar 

  31. Nehmé R, Perrin C (2013) Highly charged polyelectrolyte coatings to prevent adsorption during protein and peptide analysis in capillary electrophoresis, capillary electrophoresis of biomolecules, vol 984. Methods in molecular biology. Humana Press, Germany, pp 191–206. doi:10.1007/978-1-62703-296-4_14

    Google Scholar 

  32. Nehmé R, Perrin C, Cottet H, Blanchin M-D, Fabre H (2009) Electrophoresis 30:1888–1898

    Article  Google Scholar 

  33. Nehmé R, Perrin C, Cottet H, Blanchin MD, Fabre H (2011) J Chromatogr A 1218:3537–3544

    Article  Google Scholar 

  34. Okhonin V, Liu X, Krylov SN (2005) Anal Chem 77:5925–5929

    Article  CAS  Google Scholar 

  35. Zhang JH, Chung T, Oldenburg K (1999) J Biomol Screen 4:67–73

    Article  Google Scholar 

  36. Kupcho K, Stafslien D, Singh U, Eliason H, Reichling L, Frazee W, Horton R, Riddle S, Yi Gao Y. The Adapta™ universal kinase assay: a superior alternative to luciferase-based kinase assays. Poster available online at http://tools.invitrogen.com/content/sfs/posters/0108-Adapta-poster-comparison-to-Kinase-Glo.pdf. Accessed 7 Oct 2013

  37. Carpenter C, Duckworth B, Auger K, Cohen B, Schaffhausen B, Cantley L (1990) J Biol Chem 265:19704–19711

    CAS  Google Scholar 

  38. Gray A, Olsson H, Batty IH, Priganica L, Peter Downes C (2003) Anal Biochem 313:234–245

    Article  CAS  Google Scholar 

  39. Nehmé R, Perrin C, Cottet H, Blanchin MD, Fabre H (2008) Electrophoresis 29:3013–3023

    Article  Google Scholar 

  40. Arrio-Dupont M, Cribier S, Foucault G, Devaux PF, Albis A (1996) Biophys J 70:2327–2332

    Article  CAS  Google Scholar 

  41. Kaiser TJ, Thompson JW, Mellors JS, Jorgenson JW (2009) Anal Chem 81:2860–2868

    Article  CAS  Google Scholar 

  42. Okhonin V, Petrov AP, Krylova SM, Krylov SN (2011) Angew Chem 123:12205–12208

    Article  Google Scholar 

  43. Krylova SM, Okhonin V, Krylov SN (2009) J Sep Sci 32:742–756

    Article  CAS  Google Scholar 

  44. Badinloo M, Esmaeili-Mahani S (2013) Fundam Clin Pharmacol. doi:10.1111/fcp.12043

    Google Scholar 

  45. Gill I (2001) Chem Mater 13:3404–3421

    Article  CAS  Google Scholar 

  46. Lindsley CW, Barnett SF, Layton ME, Bilodeau MT (2012) Curr Cancer Drug Targets 8:7–18

    Article  Google Scholar 

  47. Banham-Hall E, Clatworthy M, Okkenhaug K (2012) Open Rheumatol J 6:245–258

    Article  CAS  Google Scholar 

  48. Howes AL, Chiang GG, Lang ES, Ho CB, Powis G, Vuori K, Abraham RT (2007) Mol Cancer Ther 6:2505–2514

    Article  CAS  Google Scholar 

Download references

Acknowledgments

This work was supported by “La Ligue Nationale contre le Cancer, Comité du Loiret”, the “Conseil Régional du Centre”, and the “Cancéropôle Grand-Ouest”. Thibault Saurat was the recipient of an INCa/Région Centre PhD fellowship. We are very grateful to Pr. Philippe Bougnoux for his constant support and encouragement.

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Correspondence to Reine Nehmé.

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Nehmé, R., Nehmé, H., Saurat, T. et al. New in-capillary electrophoretic kinase assays to evaluate inhibitors of the PI3k/Akt/mTOR signaling pathway. Anal Bioanal Chem 406, 3743–3754 (2014). https://doi.org/10.1007/s00216-014-7790-z

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  • DOI: https://doi.org/10.1007/s00216-014-7790-z

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