Skip to main content
Log in

X-ray crystal structures of two polymorphic forms, monoclinic and triclinic, of: 1-[(E)-2-(4-bromophenyl)1-diazenyl]-3-({3-[(E)-2-(4-bromophenyl)-1-diazenyl]-6-ethylhexahydro-1-pyrimidinyl}methyl)-4-ethylhexahydropyrimidine

  • Published:
Journal of Chemical Crystallography Aims and scope Submit manuscript

Abstract

1-[(E)-2-(4-bromophenyl)-1-diazenyl]-3-({3-[(E)-2-(4-bromophenyl)-1-diazenyl]-6-ethylhexahydro-1-pyrimidinyl}methyl)-4-ethylhexahydropyrimidine (1) has been synthesized by reaction of a mixture of formaldehyde and 1,3-pentanediamine{DYTEK®EPdiamine} with p-bromobenzenediazonium chloride. This compound crystallizes in two polymorphic forms 1-α and 1-β whose crystal structures have been determined by single crystal X-ray diffraction analysis. Both polymorphs 1-α and 1-β display crystallographic disorder within the hexahydropyrimidine rings. The molecule of 1 is built up of two equivalent 3-(aryldiazenyl)-6-ethylhexahydro-1-pyrimidinyl groups in the s-trans orientation around the central methylene group (C13). In both structures the triazene moieties adopt the anti configuration around the N=N bonds, displaying significant π-conjugation. The crystal packings are determined only by van der Waals interactions. The crystal structures of 1-α and 1-β are compared with the previously reported structure of the 5,5-dimethylhexahydropyrimidine analogue 3. Compounds 1 and 3 are isomeric with respect to the hexahydropyrimidine moiety. The structures of 1 and 3 are very different in one respect; in 1 the aryldiazenyl-hexahydropyrimidinyl groups are in the s-trans orientation around the central methylene group, whereas in 3 the arrangement of the aryldiazenylhexahydropyrimidinyl groups is the s-cis orientation. Crystal data: 1-α C25H34N8Br2, monoclinic, space group P2(1)/c, a = 9.2150(3), b = 19.4059(6), c = 15.4324(5) Å, β = 98.738(1), V = 2727.7(2) Å3, for Z = 4; 1-β C25H34N8Br2, triclinic, space group P-1, a = 9.6009(3), b = 10.7509(4), c = 14.2169(5) Å, α = 99.830(2), β = 105.973(3), γ = 95.578(1), V = 1373.9(1) Å3, for Z = 2.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  1. Hooper, D.L.; Peori, M.B.; Vaughan, K. J. Org. Chem. 1998, 63, 7437.

    Article  PubMed  Google Scholar 

  2. Glister, J.F.; Vaughan, K.; Bertolasi, V. J. Chem. Cryst. 2004, 34, 175.

    Article  Google Scholar 

  3. Peori, B., Vaughan, K.; Bertolasi, V. J. Chem. Cryst. 2004, 35(4), 301–309.

    Google Scholar 

  4. Moser, S.L.; Bertolasi, V.; Vaughan, K. J. Chem. Cryst. 2005, 35(4), 311–316.

    Article  Google Scholar 

  5. Tingley, R.; Peori, M.B.; Church, R.; Vaughan, K. Can. J. Chem. 2005, in press.

  6. Otwinowski, Z.; Minor, W. In Methods in Enzymology; Vol. 276, Part A, Carter, C.W.; Sweet, R.M., Eds.; Academic Press: London, 1997, pp 307–326.

  7. Blessing, R.H. Acta Crystallogr. 1995, A51, 33.

    Google Scholar 

  8. Altomare, A.; Burla, M.C.; Camalli, M.; Cascarano, G.; Giacovazzo, C.; Guagliardi, C.; Moliterni, A.G.; Polidori, C.; Spagna, R. J. Appl. Crystallogr. 1999, 32, 115.

    Article  Google Scholar 

  9. Sheldrick, G.M. SHELXL-97, Program for Refinement of Crystal Structures; University of Göttingen: Germany, 1997.

    Google Scholar 

  10. Nardelli, M. J. Appl. Crystallogr. 1995, 28, 659.

    Article  Google Scholar 

  11. Burnett, M.N.; Johnson, C.K. ORTEP-III, Report ORNL-6895 Oak Ridge National Laboratory, Oak Ridge, TN, 1996.

    Google Scholar 

  12. Allen, F.H.; Kennard, O.; Watson, D.G.; Brammer, G.; Orpen, G.; Taylor, R. J. Chem. Soc. Perkin Trans. 1987, 2, S1.

    Google Scholar 

  13. Cremer, D.; Pople, J.A. J. Am. Chem. Soc. 1975, 97, 1354.

    Article  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Keith Vaughan.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Tingley, R., Bertolasi, V. & Vaughan, K. X-ray crystal structures of two polymorphic forms, monoclinic and triclinic, of: 1-[(E)-2-(4-bromophenyl)1-diazenyl]-3-({3-[(E)-2-(4-bromophenyl)-1-diazenyl]-6-ethylhexahydro-1-pyrimidinyl}methyl)-4-ethylhexahydropyrimidine. J Chem Crystallogr 35, 821–828 (2005). https://doi.org/10.1007/s10870-005-4552-y

Download citation

  • Received:

  • Accepted:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s10870-005-4552-y

Keywords

Navigation