Abstract
A microbial transglutaminase (MTG) was efficiently purified by using pH-responsive affinity precipitation with Crocein orange G (COG) as the affinity ligand. The docking method was used to identify the appropriate ligand. The molecular simulation results were compared with the label-free detection data analyzed by ForteBio’s Octet. A pH-responsive polymer, PMMDN, was polymerized and subsequently coupled with COG as the ligand. The isoelectric point (pI) and recovery of PMMDN and PMMDN–COG were 4.51, 99.8,% and 4.78, 98.1 %, respectively. The optimal adsorption conditions were found to be a ligand density of 60.0 μmol/g, pH 7.0, and 0.2 mol/L NaCl. The adsorption isotherm showed that the maximum adsorption capacity was 91.32 mg/g polymer and the dissociation constant was 0.021 mg/mL. Interaction information between PMMDN–COG and MTG in the whole process of affinity precipitation were obtained by Fourier transform infrared spectroscopy (FT-IR) and scanning electron microscopy (SEM). PB (0.02 mol/L pH 7.0) in 20.0 % glycol was used to elute the binding MTG from PMMDN–COG. Under these conditions, electrophoretically pure MTG was obtained in only one step with elution recoveries of 98.96 % (protein) and 95.09 % (activity).
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Glossary
- AM1-BCC
-
Semi-empirical (AM1) with bond charge correction (BCC)
- ANTECHAMBER
-
Antechamber is a set of auxiliary programs for molecular mechanical studies
- DMS
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DMS is an open-source program written in C for computing the molecular surface of a molecule
- GRID
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Grid creates the grid files necessary for rapid score evaluation in DOCK
- Mol2
-
The Mol2 file format is a popular method for specifying chemical structures, including atom types, positions, and bonding
- SHOWBOX
-
Showbox is an interactive program for specifying the location and the size of the grids that will be calculated by the program grid
- sphere_selector
-
Sphere_selector filters the output from sphgen selecting all spheres within a user-defined radius of a target molecule
- SPHGEN
-
Sphgen generates sets of overlapping spheres to describe the shape of a molecule or molecular surface
- sphgen_cpp
-
Sphgen_cpp has the same function as Sphgen
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Ding, Z., Li, S. & Cao, X. Microbial Transglutaminase Separation by pH-Responsive Affinity Precipitation with Crocein Orange G as the Ligand. Appl Biochem Biotechnol 177, 253–266 (2015). https://doi.org/10.1007/s12010-015-1742-8
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DOI: https://doi.org/10.1007/s12010-015-1742-8