Trends in Neurosciences
Volume 34, Issue 10, October 2011, Pages 515-525
Journal home page for Trends in Neurosciences

Review
Special Issue: Hippocampus and Memory
Pattern separation in the hippocampus

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The ability to discriminate among similar experiences is a crucial feature of episodic memory. This ability has long been hypothesized to require the hippocampus, and computational models suggest that it is dependent on pattern separation. However, empirical data for the role of the hippocampus in pattern separation have not been available until recently. This review summarizes data from electrophysiological recordings, lesion studies, immediate-early gene imaging, transgenic mouse models, as well as human functional neuroimaging, that provide convergent evidence for the involvement of particular hippocampal subfields in this key process. We discuss the impact of aging and adult neurogenesis on pattern separation, and also highlight several challenges to linking across species and approaches, and suggest future directions for investigation.

Introduction

The hippocampus is often implicated in forming new associative memories, storing memories independently of each other, retrieving memories from partial cues, and flexibly applying stored memories to novel situations. David Marr [1] was the first to suggest that recurrent collaterals (Glossary) enable a region to act as an auto-association network capable of pattern completion, the process by which incomplete or degraded representations are filled-in based on previously stored representations. Pattern completion allows for accurate generalization in the face of noise or partial sensory input. Balanced against pattern completion is the process of pattern separation, whereby similar representations are stored in a distinct, non-overlapping (orthogonalized) fashion (Figure 1a). If one were not able to perform this mnemonic discrimination, encoding new information would overwrite similar previously stored information, leading to catastrophic interference 2, 3.

Since Marr [1], emphasis has been placed on separation and completion in computational models of the hippocampus 2, 3, 4, 5, 6, 7, 8. These models suggest that the dentate gyrus (DG) granule cells are capable of performing especially strong and domain-agnostic pattern separation on the overlapping/distributed representations arriving from the entorhinal cortex (EC), projecting this signal onto the CA3 subfield of the hippocampus (Figure 1b). The CA3 receives three major excitatory inputs: (i) mossy fiber input from DG granule cells 9, 10, (ii) perforant path input directly from layer II of the EC [11], and (iii) recurrent collateral input from CA3 neurons [12] (Figure 2). The mossy fiber pathway is a powerful unidirectional input from the DG that utilizes large synapses on the proximal apical dendrites of CA3 pyramidal cells. These ‘detonator synapses’ [4] are known for their ability to strongly depolarize CA3 neurons 8, 13, 14. The extensive recurrent collateral network of CA3 has led learning theorists to postulate that the region can function as an auto-associative pattern completion network 8, 15 via attractor dynamics [16].

Neurons in layer II of the EC have collaterals that directly reach CA3, bypassing the DG [11]. This finding has led to the postulation that the mossy fiber pathway from DG to CA3 is used to force new pattern separated representations onto CA3 neurons to reduce interference and support new learning, whereas the weaker direct projection from layer II EC neurons can be used to provide a cue for recall [17]. Consistent with this idea, the inactivation of mossy fibers interferes with new learning while leaving recall intact [18]. Also, lesioning the DG input into CA3 impairs encoding but not retrieval, whereas lesioning the perforant path input directly to CA3 impairs retrieval but spares encoding [19]. Thus, it is likely that the CA3 network ‘associates’ the mossy fiber input coming from the DG granule cells with the perforant path input coming from the EC to facilitate later recall. In summary, computational models of hippocampal learning propose that the DG signal can drive activity in the CA3 along with direct EC input, with the CA3 demonstrating pattern separation signals under some circumstances and pattern completion signals under others (Figure 1b).

Section snippets

How does pattern separation fit with other notions of memory?

The characteristic forms of memory that have been attributed to the hippocampus and not the adjacent cortical structures of the parahippocampal gyrus (e.g., recollection, conjunctions, binding-in-context, complex associations) all place clear demand on pattern separation. In fact, some have argued that the hallmark feature of episodic memory is pattern separation 3, 20. One of the liveliest debates in the literature regarding the role of the hippocampus in recognition memory involves

Electrophysiological recordings and immediate-early gene imaging

Electrophysiological studies in the rodent have largely supported the ideas put forth in the computational models. The first study [25] used a cue mismatch paradigm to examine CA1 and CA3 place cell firing patterns as the environment was rotated, and found that CA3 place fields were much more correlated across rotated cue versions than were CA1 place fields (i.e. pattern completion in CA3). A second study [26] used a similar behavioral apparatus in two distinct environments, instead of changing

Separation and completion are not synonymous with remapping and stability

Place cell remapping is typically defined as place cells having distinct firing patterns in different environments. There are at least two different kinds of remapping, rate remapping (substantial changes in firing rate in the presence of a stable place map, such that the new pattern of activity is largely orthogonal to the previous pattern of activity) and global remapping (complete reorganization of the place code such that both rate and place are statistically independent). By contrast,

Separation and completion outside the hippocampus

It is important to note that pattern separation and pattern completion are not unique to the hippocampus, although this is where they have been most studied (and where they could be most domain agnostic). Similar phenomena also manifest in other neural circuits. These computational principles offer a framework for understanding the change in network output pattern as a function of input, and this can help us to understand other cognitive processes such as visual perception [36], object

Is the DG necessary for pattern separation?

Although the recording and imaging data suggest a functional role for the DG in pattern separation, such studies are unable to determine if the DG is necessary for successful pattern separation. Lesion studies in rats, however, have reliably demonstrated that the DG is required for spatial pattern separation 45, 46. In a recent study [47] the authors placed rats with localized DG lesions in an environment with two objects spaced 60 cm apart. When the animals were later placed in the same

Is the CA3 necessary for pattern completion?

Evidence for the role of CA3 in pattern completion comes from several studies. CA3-lesioned mice have impaired recall of a place–object association after one-trial learning [50], suggesting that the CA3 is needed for rapid object–place recall or when completion from an incomplete cue (either object or place alone) is necessary. In another test of the role of CA3, rats were trained to find food under objects in different locations using four extra-maze cues [51]. During testing, one, two, and

Neurocognitive aging as a model for hippocampal pattern separation deficits

Rodent, primate and human studies have shown that the DG is a region that is particularly vulnerable to the effects of aging 53, 54, 55, 56, 57. Electrophysiological data in aged rats showed reductions in field excitatory post-synaptic potentials recorded in the DG 58, 59, and also reduced presynaptic fiber potentials at the perforant path–DG synapse 60, 61. Based on the purported function of the DG, one might predict that aging would be associated with pattern separation impairments.

Early

The role of newborn granule cells in pattern separation

Adult neurogenesis in the DG results in functional granule cells that can integrate into neural circuitry within the DG [79]. One study [80] used focal X-irradiation to ablate neurogenesis in adult mice and tested their spatial pattern separation performance using an eight-arm radial maze delayed non-match to place (DNMP) task. Irradiated mice performed as well as controls when the separation between sample and correct arms was high (three or four intervening arms), but were significantly

Challenges and limitations in linking rodents, humans, and models

The work summarized in this review leads to a relatively consistent picture across species and different experimental approaches, and provides convincing evidence that the DG is crucial for pattern separation and, furthermore, that this is a key component of forms of memory often attributed to the hippocampus. However, there are some notable limitations and challenges that still need to be addressed.

Concluding remarks

The hippocampus is especially well-suited, by virtue of its anatomical wiring and neural firing properties, to perform pattern separation and pattern completion computations. In particular, an abundance of evidence indicates that the DG is necessary for pattern separation, whereas lesion and genetic knockout studies have strongly suggested a functional role for the CA3 in pattern completion. Electrophysiological recordings, IEG studies, and human high-resolution fMRI studies have all

Acknowledgments

The authors thank Drs. Jim Knierim and Jill Leutgeb for helpful discussions and feedback, as well as the National Institute on Aging for supporting the authors’ research (NIA R01-AG034613).

Glossary

Adult neurogenesis
the process by which new neurons are continually generated from neural stem cells throughout adulthood. Known to occur in the subventricular zone (giving rise to olfactory bulb neurons) and in the subgranular zone (giving rise to dentate granule cells).
Attractor network
a set of network nodes that are connected recurrently such that their dynamics give rise to stable patterns (attractor states). No matter the initial state, the network will settle into a final state that is a

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