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Parameter estimation in topological analysis of binary tree structures

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Abstract

Different types of random binary topological trees (like neuronal processes and rivers) occur with relative frequencies that can be explained in terms of growth models. It will be shown how the model parameter determining the mode of growth can be estimated with the maximum likelihood procedure from observed data. Monte Carlo simulations were used to study the distributional properties of this estimator which appeared to have a negligible bias. It is shown that the minimum chi-square procedure yields an estimate that is very close to the maximum likelihood estimate. Moreover, the goodness-of-fit of the growth model can be inferred directly from the chi-square statistic. To illustrate the procedures we examined axonal trees from the goldfish tectum. A notion of complete partition randomness is presented as an alternative to our growth hypotheses.

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References

  • Berkson, J. 1980. “Minimum Chi-Square, Not Maximum Likelihood!”Ann. Statist. 12, 457–487.

    MathSciNet  Google Scholar 

  • Berry, M., P. McConnell and J. Sievers. 1980. “Dendritic Growth and the Control of Neuronal Form.” InCurrent Topics in Developmental Biology, R. K. Hunt (Ed.), Vol. 15, pp. 67–101. New York: Academic Press.

    Google Scholar 

  • Buckland, S. T. 1984. “Monte Carlo Confidence Intervals.”Biometrics 40, 811–817.

    Article  MATH  Google Scholar 

  • Cochran, W. G. 1977.Sampling Techniques 3rd Edn. New York: J. Wiley.

    Google Scholar 

  • Conover, W. J. 1980.Practical Nonparametric Statistics, 2nd Edn. New York: J. Wiley.

    Google Scholar 

  • Cox, D. R. and D. V. Hinkley. 1974.Theoretical Statistics. London: Chapman and Hall.

    Google Scholar 

  • Cramér, H. 1946.Mathematical Methods of Statistics. Princeton: Princeton University Press.

    Google Scholar 

  • Diggle, P. J. 1983.Statistical Analysis of Spatial Point Patterns. London: Academic Press.

    Google Scholar 

  • Easter, S. S., Jr. and C. A. O. Stuermer. 1984. “An Evaluation of the Hypothesis of Shifting Terminals in Goldfish Optic Tectum.”J. Neurosci. 4, 1052–1063.

    Google Scholar 

  • Harding, E. F. 1971. “The Probabilities of Rooted Tree-shapes Generated by Random Bifurcation.”Adv. appl. Prob. 3, 44–77.

    Article  MATH  MathSciNet  Google Scholar 

  • Lehmann, E. L. 1983.Theory of Point Estimation. New York: J. Wiley.

    Google Scholar 

  • Stuermer, C. A. O. 1984. “Rules for Retinotectal Terminal Arborizations in the Goldfish Optic Tectum.”J. comp. Neurol. 229, 214–232.

    Article  Google Scholar 

  • Van Pelt, J. and R. W. H. Verwer. 1983. “The Exact Probabilities of Branching Patterns Under Terminal and Segmental Growth Hypotheses.”Bull. math. Biol. 45, 269–285.

    Article  MATH  Google Scholar 

  • — and —. 1985. “Growth Models (Including Terminal and Segmental Branching) for Topological Binary Trees.”Bull. math. Biol. 47, 323–336.

    Article  MATH  MathSciNet  Google Scholar 

  • — and — 1986. “Topological Properties of Binary Trees Growth with Order-dependent Branching Probabilities.”Bull. math. Biol 48, 197–211.

    Article  MATH  MathSciNet  Google Scholar 

  • —— and H. B. M. Uylings. 1986. “Application of Growth Models to the Topology of Neuronal Branching Patterns.”J. Neurosci. Meth. 18, 153–165.

    Article  Google Scholar 

  • Verwer, R. W. H., J. Van Pelt and H. B. M. Uylings. 1985. “A Simple Statistical Test for the Vertex Ratio Using Monte Carlo Simulation.”J. Neurosci. Meth. 14, 137–142.

    Article  Google Scholar 

  • — and —. 1986. “Descriptive and Comparative Analysis of Geometrical Properties of Neuronal Tree Structures.”J Neurosci. Meth. 18, 179–206.

    Article  Google Scholar 

  • Verwer, R. W. H. J. Van Pelt, and C. A. O. Stuermer. 1987. “Topological Analysis of Goldfish Retinotectal Axon Terminals.” (submitted).

  • Wilks, S. S. 1962.Mathematical Statistics. New York: J. Wiley.

    Google Scholar 

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Verwer, R.W.H., Van Pelt, J. & Noest, A.J. Parameter estimation in topological analysis of binary tree structures. Bltn Mathcal Biology 49, 363–378 (1987). https://doi.org/10.1007/BF02460126

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  • DOI: https://doi.org/10.1007/BF02460126

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