Data and code availability
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Manually labeled annotations for 3D-Unet training and raw light-sheet images are available at https://braini.renci.org/ through the “Download Image” service.
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NuMorph source code is available at https://bitbucket.org/steinlabunc/numorph/ and deposited at Zenodo. The DOI is listed in the Key Resource Table.
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Any additional information required to reanalyze the data reported in this paper is available from the lead contact upon request.