Skip to main content

Thank you for visiting nature.com. You are using a browser version with limited support for CSS. To obtain the best experience, we recommend you use a more up to date browser (or turn off compatibility mode in Internet Explorer). In the meantime, to ensure continued support, we are displaying the site without styles and JavaScript.

  • Paper
  • Published:

Metabolic instability of plasmid DNA in the cytosol: a potential barrier to gene transfer

Abstract

Inefficient nuclear delivery of plasmid DNA is thought to be one of the daunting hurdles to gene transfer, utilizing a nonviral delivery system such as polycation–DNA complex. Following its internalization by endocytosis, plasmid DNA has to be released into the cytosol before its nuclear entry can occur. However, the stability of plasmid DNA in the cytoplasm, that may play a determinant role in the transfection efficiency, is not known. The turnover of plasmid DNA, delivered by microinjection into the cytosol, was determined by fluorescence in situ hybridization (FISH) and quantitative single-cell fluorescence video-image analysis. Both single- and double-stranded circular plasmid DNA disappeared with an apparent half-life of 50–90 min from the cytoplasm of HeLa and COS cells, while the amount of co-injected dextran (MW 70000) remained unaltered. We propose that cytosolic nuclease(s) are responsible for the rapid degradation of plasmid DNA, since (1) elimination of plasmid DNA cannot be attributed to cell division or to the activity of apoptotic and lysosomal nucleases; (2) disposal of microinjected plasmid DNA was inhibited in cytosol-depleted cells or following the encapsulation of DNA in phospholipid vesicles; (3) generation and subsequent elimination of free 3′-OH ends could be detected by the terminal deoxynucleotidyl transferase-mediated dUTP nick end-labeling assay (TUNEL), reflecting the fragmentation of the injected DNA; and finally (4) isolated cytosol, obtained by selective permeabilization of the plasma membrane, exhibits divalent cation-dependent, thermolabile nuclease activity, determined by Southern blotting and 32P-release from end-labeled DNA. Collectively, these findings suggest that the metabolic instability of plasmid DNA, caused by cytosolic nuclease, may constitute a previously unrecognized impediment for DNA translocation into the nucleus and a possible target to enhance the efficiency of gene delivery.

This is a preview of subscription content, access via your institution

Access options

Buy this article

Prices may be subject to local taxes which are calculated during checkout

Figure 1
Figure 2
Figure 3
Figure 4
Figure 5
Figure 6
Figure 7

Similar content being viewed by others

References

  1. Zabner J et al. Cellular and molecular barriers to gene transfer by a cationic lipid J Biol Chem 1995 270: 18997–19007

    Article  CAS  Google Scholar 

  2. Fasbender A et al. Complexes of adenovirus with polycationic polymers and cationic lipids increase the efficiency of gene transfer in vitro and in vivo J Biol Chem 1997 272: 6479–6489

    Article  CAS  Google Scholar 

  3. Chowdhury NR et al. Microtubular disruption prolongs the expression of human bilirubin-uridinediphosphoglucuronate-glucuronyltransferase-1 gene transferred into Gunn rat livers J Biol Chem 1996 271: 2341–2346

    Article  CAS  Google Scholar 

  4. Coonrod A, Li F-Q, Horwitz M . On the mechanism of DNA transfection: efficient gene transfer without viruses Gene Therapy 1997 4: 1313–1321

    Article  CAS  Google Scholar 

  5. Dowty M, Williams P, Zhang G, Wolff J . Plasmid DNA entry into post-mitotic nuclei of primary rat myotubes Proc Natl Acad Sci USA 1995 92: 4572–4576

    Article  CAS  Google Scholar 

  6. Farhood H, Serbina N, Huang L . The role of dioleoyl phosphatidylethanolamine in cationic liposome mediated gene transfer Biochim Biophys Acta 1995 1235: 289–295

    Article  Google Scholar 

  7. Zelphati O, Szoka FC . Mechanism of oligonucleotide release from cationic liposomes Proc Natl Acad Sci USA 1996 93: 11493–11498

    Article  CAS  Google Scholar 

  8. Zelphati O, Szoka FC . Intracellular distribution and mechanism of delivery of oligonucleotides mediated by cationic lipids Pharm Res 1996 13: 1367–1372

    Article  CAS  Google Scholar 

  9. Gao X, Huang L . Cytoplasmic expression of a reporter gene by co-delivery of T7 RNNA polymerase and T7 promoter sequence with cationic liposomes Nucleic Acids Res 1993 21: 2867–2872

    Article  CAS  Google Scholar 

  10. Fasbender A et al. Effect of co-lipids in enhancing cationic lipid-mediated gene transfer in vitro and in vivo Gene Therapy 1997 4: 716–725

    Article  CAS  Google Scholar 

  11. Collas P, Alestrom P . Nuclear localization signal of SV40 T antigen directs import of plasmid DNA into sea urchin male pronuclei in vitro Mol Reprod Develop 1996 45: 431–438

    Article  CAS  Google Scholar 

  12. Fasbender A, Zabner J, Zeiher BG, Welsh MJ . A low rate of cell proliferation and reduced DNA limit cationic lipid-mediated gene transfer to primary cultures of ciliated human airway epithelia Gene Therapy 1997 4: 1173–1180

    Article  CAS  Google Scholar 

  13. Wilke M et al. Efficacy of a peptide-based gene delivery system depends on mitotic activity Gene Theapy 1996 3: 1133–1142

    CAS  Google Scholar 

  14. Sebestyen MG eta l . DNA vector chemistry: the covalent attachment of signal peptides to plasmid DNA Nature Biotechnol 1998 16: 80–85

    Article  Google Scholar 

  15. Dunn WA . Autophagy and related mechanisms of lysosome-mediated protein degradation Trends Cell Biol 1994 4: 139–143

    Article  CAS  Google Scholar 

  16. Hagstrom JE et al. Nuclear import of DNA in digitonin-permeabilized cells J Cell Sci 1997 110: 2323–2331

    CAS  PubMed  Google Scholar 

  17. Liao T-H, Liao W-C, Chang H-C, Lu K-S . Deoxyribonuclease II purified from the isolated lysosomes of porcine spleen and from porcine liver homogenates. Comparison with deoxyribonuclease II purified from porcine spleen homogenates Biochim Biophys Acta 1989 1007: 15–22

    Article  CAS  Google Scholar 

  18. Luthman H, Magnusson G . High efficiency polyoma DNA transfection of chloroquine treated cells Nucleic Acids Res 1983 11: 1295–1308

    Article  CAS  Google Scholar 

  19. Helenius A, Marsh M, White J . Inhibition of Semliki forest virus penetration by lysomotropic weak bases J Gen Virol 1982 58: 47–61.

    Article  CAS  Google Scholar 

  20. Lukacs GL et al. Conformational maturation of CFTR but not its mutant counterpart (ΔF508) occurs in the endoplasmic reticulum and requires ATP EMBO J 1994 13: 6076–6086

    Article  CAS  Google Scholar 

  21. Adam SA, Sterne Marr R, Gerace L . Nuclear import in permeabilized cells requires soluble cytoplasmic factors J Cell Biol 1990 111: 807–816

    Article  CAS  Google Scholar 

  22. Bittner MA, Holz RW . Effect of tetanus toxin on catecholamine release from intact and digitonin permeabilized chromaffin cells J Neurochem 1988 51: 451–456

    Article  CAS  Google Scholar 

  23. Cappaccioli S et al. Cationic lipids improve antisense oligonucleotide uptake and prevent degradation in cultured cells and in human serum Biochem Biophys Res Com 1993 197: 818–825

    Article  Google Scholar 

  24. Chiou HC et al. Enhanced resistance to nuclease degradation of nucleic acids complexed to asialoglycoprotein–polylysine carriers Nucleic Acids Res 1994 22: 5439–5446

    Article  CAS  Google Scholar 

  25. Wheeler JJ et al. Stabilized plasmid-lipid particles: construction and characterization Gene Therapy 1999 (in press)

    Article  CAS  Google Scholar 

  26. Tanswell AK et al. Liposome-mediated transfection of fetal lung epithelial cells: DNA degradation and enhanced superoxide toxicity Am J Physiol 1998 275: L452–L460

    CAS  PubMed  Google Scholar 

  27. Chen JW et al. Identification of two lysosomal membrane glycoproteins J Cell Biol 1985 101: 85–95

    Article  CAS  Google Scholar 

  28. Miyake K, McNeil PL . Vesicle accumulation and exocytosis at sites of plasma membrane disruption J Cell Biol 1995 131: 1737–1745

    Article  CAS  Google Scholar 

  29. Steinhardt RA, Bi G, Alderton JM . Cell membrane resealing by a vesicular mechanism similar to neurotransmitter release Science 1994 263: 390–393

    Article  CAS  Google Scholar 

  30. Polzar B et al. Overexpression of deoxyribuonuclease I (DNase I) transfected into COS-cells: its distribution during apoptotic cell death Eur J Cell Biol 1993 62: 397–405

    CAS  PubMed  Google Scholar 

  31. Polzar B et al. Distribution of DNase I in rat tissues and its correlation to cellular turnover and apoptosis (programmed cell death) Eur J Cell Biol 1994 64: 200–210

    CAS  PubMed  Google Scholar 

  32. Peitsch MC, Mannherz HG, Tschopp J . The apoptotic endonucleases: cleaning up after cell death? Trends Cell Biol 1994 4: 37–41

    Article  CAS  Google Scholar 

  33. Collins MKL et al. An apoptotic endonuclease activated either by decreasing the pH or by increasing calcium J Cell Sci 1996 109: 2393–2399

    CAS  PubMed  Google Scholar 

  34. Kataoka A et al. Association of high molecular weight DNA fragmentation with apoptotic or non-apoptotic cell death induced by calcium ionophore FEBS Lett 1995 364: 264–267

    Article  CAS  Google Scholar 

  35. Villalba M et al. Ionic regulation of endonuclease activity in PC12 cells Biochem J 1995 311: 1033–1038

    Article  CAS  Google Scholar 

  36. Sakahira H, Enari M, Nagata S . Cleavage of CAD inhibitor in CAD activation and DNA degradation during apoptosis Nature 1998 391: 96–99

    Article  CAS  Google Scholar 

  37. Enari M et al. A caspase-activated DNase that degrades DNA during apoptosis, and its inhibitor ICAD Nature 1998 391: 43–50.

    Article  CAS  Google Scholar 

  38. Lazarovici P et al. Affinity purified tetanus toxin binds to isolated chromaffin granules and inhibits catecholamine release in digitonin-permeabilized chromaffin cells FEBS Lett 1989 253: 121–128

    Article  CAS  Google Scholar 

  39. Batistatou A, Green LA . Internucleosomal DNA cleavage and neuronal cell death/survival J Cell Biol 1993 122: 523–532

    Article  CAS  Google Scholar 

  40. Benchokroun Y, Couprie J, Larsen AK . Aurintricarboxilic acid, a putative inhibitor of apoptosis, is a potent inhibitor of DNA topoisomerase II in vitro and in Chinese hamster fibrosarcoma cells Biochem Pharmacol 1995 49: 305–313

    Article  CAS  Google Scholar 

  41. Wittels M, Spear PG . Penetration of cells by herpes simplex virus does not require a low pH-dependent endocytic pathway Virus Res 1991 18: 271–290

    Article  CAS  Google Scholar 

  42. Greber UF, Willetts M, Webster P, Helenius A . Stepwise dismantling of adenovirus 2 during entry into cells Cell 1993 75: 477–486

    Article  CAS  Google Scholar 

  43. Greber UF, Singh I, Helenius A . Mechanism of virus uncoating Trends Microbiol 1994 2: 52–56

    Article  CAS  Google Scholar 

  44. Zauner W . Glycerol and polylysine synergise in their ability to rupture vesicular membranes: a mechanism for increase transferrin–polylysine-mediated gene transfer Exp Cell Res 1997 232: 137–145

    Article  CAS  Google Scholar 

  45. Plank C et al. The influence of endosome-disruptive peptides on gene transfer using synthetic virus-like gene transfer systems J Biol Chem 1994 269: 12918–12924

    CAS  PubMed  Google Scholar 

  46. Nakanishi A et al. Association with capsid protein promotes nuclear targeting of simian virus 40 DNA Proc Natl Acad Sci USA 1996 93: 96–100

    Article  CAS  Google Scholar 

  47. Kann M, Bischof A, Gerlich WH . In vitro model for the nuclear transport of the hepadnavirus genome J Virol 1997 71: 1310–1316

    CAS  PubMed  PubMed Central  Google Scholar 

  48. Lechardeur D et al. The cytosol constitutes a metabolic barrier against transgene delivery to the nucleus Ped Pulm 1997 S14: 255

    Google Scholar 

  49. Capecchi MR . High efficiency transformation by direct microinjection of DNA into cultured mammalian cells Cell 1980 22: 479–488

    Article  CAS  Google Scholar 

  50. Luby-Phelps K, Castle PE, Taylor DL, Lanni F . Hindered diffusion of inert tracer particles in the cytoplasm of mouse 3T3 cells Proc Natl Acad Sci USA 1987 84: 4910–4913

    Article  CAS  Google Scholar 

  51. Luby-Phelps K . Physical properties of cytoplasm Curr Opin Cell Biol 1994 6: 3–9

    Article  CAS  Google Scholar 

  52. Seksek O, Biwersi J, Verkman AS . Translational diffusion of macromolecule-sized solutes in cytoplasm and nucleus J Cell Biol 1997 138: 131–142

    Article  CAS  Google Scholar 

  53. Pollard H et al. Polyethylenimine but not the cationic lipids promotes transgene delivery to the nucleus in mammalian cells J Biol Chem 1998 273: 7507–7511

    Article  CAS  Google Scholar 

  54. Vanderbilt JN, Bloom KS, Anderson JN . Endogenous nucleases J Biol Chem 1982 257: 13009–13017

    CAS  PubMed  Google Scholar 

  55. Cummings OW, King TC, Holden JA, Low RL . Purification and characterization of a potent endonuclease in extracts of bovine heart mitochondria J Biol Chem 1987 262: 2005–2015

    CAS  PubMed  Google Scholar 

  56. Wyllie AH . Glucocorticoid-induced thymocyte apoptosis is associated with endogenous endonuclease activity Nature 1980 284: 555–556

    Article  CAS  Google Scholar 

  57. Torriglia A et al. Involvement of DNase II in nuclear degeneration during lens cell differentiation J Biol Chem 1995 270: 28579–28585

    Article  CAS  Google Scholar 

  58. Rauch F et al. Androgen ablation leads to an upregulation and intranuclear accumulation of DNase I in rat prostate epithelial cells paralleling their apoptotic elimination J Cell Biol 1997 137: 909–923

    Article  CAS  Google Scholar 

  59. Barry MA, Eastman A . Identification of deoxyribonuclease II as an endonuclease involved in apoptosis Arch Biochem Biophys 1993 300: 440–450

    Article  CAS  Google Scholar 

  60. Montague JW, Hughes FM, Cidlowski JA . Native recombinant cyclophilins A, B, and C degrade DNA independently of peptidylprolyl cis-trans-isomerase activity J Cell Biol 1997 272: 6677–6684

    CAS  Google Scholar 

  61. Sodeik B, Ebersold MW, Helenius A . Microtubule-mediated transport of incoming herpes simplex virus 1 capsids to the nucleus J Cell Biol 1997 136: 1007–1021

    Article  CAS  Google Scholar 

  62. Radloff R, Bauer W, Vinograd J . A dye-buoyant-density method for the detection and isolation of closed circular duplex DNA: the closed circular DNA in HeLa cells Proc Natl Acad Sci USA 1967 57: 1514–1521

    Article  CAS  Google Scholar 

  63. Vieira J, Messing J . Production of single-stranded plasmid DNA Meth Enzymol 1987 153: 3–11

    Article  CAS  Google Scholar 

  64. Trask BJ . DNA localization in metaphase and interphase cells by fluorescence in situ hybridization Meth Cell Biol 1991 35: 3–35

    Article  CAS  Google Scholar 

  65. Hofer AM, Machen TE . Technique for in situ measurements of calcium in intracellular inositol 1,4,5-trisphosphate-sensitive stores using the fluorescent indicator mag-fura-2 Proc Natl Acad Sci USA 1993 90: 2598–2602

    Article  CAS  Google Scholar 

  66. McGraw TE, Pytowski B, Arzt J, Ferrone C . Mutagenesis of the human transferrin receptor: two cytoplasmic phenylalanines are required for efficient internalization and a second-site mutation is capable of reverting an internalization-defective phenotype J Cell Biol 1991 112: 853–861

    Article  CAS  Google Scholar 

  67. Storrie B, Madden EA . Isolation of subcellular organelles Meth Enzymol 1990 182: 203–227

    Article  CAS  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Rights and permissions

Reprints and permissions

About this article

Cite this article

Lechardeur, D., Sohn, KJ., Haardt, M. et al. Metabolic instability of plasmid DNA in the cytosol: a potential barrier to gene transfer. Gene Ther 6, 482–497 (1999). https://doi.org/10.1038/sj.gt.3300867

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1038/sj.gt.3300867

Keywords

This article is cited by

Search

Quick links