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Structure of Ascochyta lentis in Australia revealed with random amplified polymorphic DNA (RAPD) markers

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Abstract

The genetic variation of Ascochyta lentis in Australia was investigated using random amplified polymorphic DNA (RAPD) analysis of 23 isolates. Of the 87 loci assessed, 86 were polymorphic. The most closely related isolates were from Victoria and South Australia, and they shared identical banding profiles. The most genetically distant isolates were from South Australiaand Western Australia (83% dissimilar). Analysis of molecular variance showed low genetic variation between groups of isolates originating from either within or outside Australia (4%). Large variation within each group (96%) indicated similar pathogen variability within and outside Australia. Partitioning of variation within Australian states was shown. Isolates collected within South Australia were least variable (1%) and isolates collected within Western Australia were most variable (61%). Increased variation in Western Australia is thought to have occurred through multiple introductions andlor the frequent presence of both mating types. Furthermore, two RAPD markers used in unison were able to explaino ver 50% of the variation in isolate pathogenicity. No RAPD markers were found that discriminated mating type.

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References

  • Ahmed, S.K. and Morrall, R.A.A. (1995) — Population changes in Ascochytafabae f, sp. lentis over 15 years of lentil cultivation in Saskatchewan. In Proceedings 2nd European Conference on Grain Legumes, Copenhagen. p. 76.

  • Ahmed, S.K., Morrall, R.A.A. and Kaiser, W.J. (1996) — Distribution of mating types of Ascochyta fabae f. sp. lentis. Canadian Journal of Plant Pathology 18: 347–353.

    Article  Google Scholar 

  • Ali, S.M., Nitschke, L.F., Dube, A.J., Krause, M.R. and Cameron, B. (1978) — Selection of pea lines for resistance to pathotypes of Ascochytapinodes, A. pisi, and Phoma medicaginis var, pinodella. Australian Journal of Agricultural Research 29: 841–849.

    Article  Google Scholar 

  • Apostol, B.L., Black, W.C., Miller, B.R., Reiter, P. and Beaty, B.J. (1993) — Estimation of the number of full sibling families at an oviposition site using RAPD-PCR markers: Applications to the mosquito Aedes aegypti. Theoretical and Applied Genetics 86: 991–1000.

    Article  CAS  Google Scholar 

  • Arnau, J., Housego, A.P. and Oliver, R.P. (1994) — The use of RAPD markers in the genetic analysis of the plant pathogenic fungus. Current Genetics 25: 438–444.

    Article  CAS  PubMed  Google Scholar 

  • Excoffier, L. (1993) — WINAMOVA. Genetics and Biometry Laboratory, Department of Anthropology, University of Geneva, Switzerland: ftp: anthropologie.unige.ch

    Google Scholar 

  • Excoffier, L., Smouse, P.E. and Quattro, J.M. (1992) — Analysis of molecular variance inferred from metric distances among DNA haplotypes: Application to human mitochondrial DNA restriction data. Genetics 131: 479–491.

    CAS  PubMed  Google Scholar 

  • Fischer, C., Porta-Puglia, A. and Barz, W. (1995) — RAPD analysis of pathogenic variability in Ascochyta rabiei. Journal ofPhytopathology 143: 601–607.

    Article  CAS  Google Scholar 

  • Gossen, B.D., Sheard, J.W., Beauchamp, C.J. and Morrall, R.A.A. (1986) — Ascochyta lentis renamed Ascochyta fabae f. sp, lentis. Canadian Journal of Plant Pathology 8: 154- 160.

    Article  Google Scholar 

  • Kaiser, W.J. (1997a) — Intra- and international spread of ascochyta pathogens of chickpea, faba bean and lentil. Canadian Journal of plant Pathology 19: 215–224.

    Article  Google Scholar 

  • Kaiser, W.J. (1997b) — Distribution of mating types and the teleomorph of Ascochyta rabiei on chickpea in Turkey. Plant Disease 81: 1284–1287.

    Article  Google Scholar 

  • Kaiser, W.J. and Hallier, B.C. (1993) — Didymella sp., the teleomorph of Ascochyta fabae f. sp. lentis, on lentil straw. Phytopathology 83: 692 (Abstr.).

    Google Scholar 

  • Kaiser, W.J., Wang, B.C. and Rogers, J.D. (1997) — Ascochyta fabae and A. lentis: Host specificity, teleomorphs (Didymella), hybrid analysis and taxonomic status. Plant Disease 81: 809–816.

    Article  Google Scholar 

  • Kolmer, J.A., Liu, J.Q. and Sies, M. (1995) — Virulence and molecular polymorphism in Puccinia recondita f. sp. tritici in Canada. Phytopathology 85: 276–285.

    Article  CAS  Google Scholar 

  • McDonald, B.A. and McDermott, J.M. (1993) — Population genetics of plant pathogenic fungi. BioScience 43: 311–319.

    Article  Google Scholar 

  • Morjane, H., Geistlinger, J., Harrabi, M., Weising, K. and Kahl, G. (1994) — Oligonucleotide fingerprinting detects genetic diversity among Ascochyta rabiei isolates from a single chickpea field in Tunisia. Current Genetics 26: 191–197.

    Article  CAS  PubMed  Google Scholar 

  • Nasir, M. (1998) — Improvement of drought and disease resistance in lentils in Nepal, Pakistan and Australia. Mid-Term Report, Australian Centre for International Agricultural Research project PN-9436.

  • Nasir M. and Bretag T.W. (1997a) — Prevalence of Ascochyta fabae f, sp, lentis on lentil seed from Victoria, Australia. Australasian Plant Pathology 26: 117–120.

    Article  Google Scholar 

  • Nasir, M. and Bretag, T. W. (1997b) —Pathogenic variability in Australian isolates of Ascochyta lentis. Australasian Plant Pathology 26: 217–220.

    Article  Google Scholar 

  • Nasir, M. and Hoppe, H. H. (1991) — Studies on pathotype differentiation within Mycosphaerella pinodes (Berk and Bloxam) Vestergren, a component of the Ascochyta-disease-complex of peas (Pisum sativum L.). Zeitschrift fur Pjlanzen-krankheiten und Pflanzenschutz 98: 616–626.

    Google Scholar 

  • Peltonen, S., Jalli, M., Karnrniovirta, K., and Karjalainen, R. (1996) — Genetic variation in Drechslera teres populations as indicated by RAPD markers. Annals of Applied Biology 128: 465–477.

    Article  CAS  Google Scholar 

  • Plummer, K.M., Dunse, K. and Howlett, B.J. (1994) — Non-aggressive strains of the blackleg fungus, Leptosphaeria maculans, are present in Australia and can be distinguished from aggressive strains by molecular analysis. Australian Journal of Botany 42: 1–8.

    Article  CAS  Google Scholar 

  • Porta-Puglia, A., Crino, P. and Mosconi, C. (1996) — Variability in virulence to chickpea of an Italian population of Ascochyta rabiei. Plant Disease 80: 39–41,

    Article  Google Scholar 

  • Rashid, K.Y., Bernier, C.C. and Conner, R.L. (1991) — Evaluation of faba bean for resistance to Ascochyta fabae and development of host differentials for race identification. Plant Disease 75: 852–855.

    Article  Google Scholar 

  • Schafer, C. and Wostemeyer. J. (1992) — Random primer dependent PCR differentiates aggressive from nonaggressive isolates of oilseed rape pathogen Phoma lingam (Leptosphaeria maculans). Journal of Phytopathology 136: 124–136.

    Article  Google Scholar 

  • Sicard, D., Michalakis, Y., Dron, M. and Neema, C. (1997) — Genetic diversity and pathogenic variation of Colletotrichum lindemuthianum in the three centres of diversity of its host, Phaseolus vulgaris. Phytopathology 87: 807–813.

    Article  CAS  PubMed  Google Scholar 

  • Taylor, P.W.J., Geijskes, J. R., Ko, H-L., Fraser, T.A., Henry, R.J. and Birch, R.G. (1995) — Sensitivity of random amplified polymorphic DNA analysis to detect genetic changes in sugarcane during tissue culture. Theoretical and Applied Genetics 90: 1168–1173.

    Article  Google Scholar 

  • Udupa, S.M., Weigand, F., Saxena, M.C. and Kahl, G. (1998) — Genotyping with RAPD and microsatellite markers resolves pathotype diversity in the ascochyta blight pathogen of chickpea. Theoretical and Applied Genetics 97: 299–307.

    Article  CAS  Google Scholar 

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Ford, R., Garnier-Géré, P.H., Nasir, M. et al. Structure of Ascochyta lentis in Australia revealed with random amplified polymorphic DNA (RAPD) markers. Australasian Plant Pathology 29, 36–45 (2000). https://doi.org/10.1071/AP00006

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