TTY2: A Multicopy Y-Linked Gene Family
- Eleni Makrinou1,5,
- Margaret Fox1,
- Michael Lovett1,
- Kim Haworth1,
- Jessie M. Cameron3,
- Kay Taylor4, and
- Yvonne H. Edwards1,6
- 1MRC Human Biochemical Genetics Unit, University College London, Wolfson House, London NW1 2HE, UK; 2Division of Human Genetics, Department of Genetics, Washington University Medical Center, St. Louis, Missouri 63110-8232, USA; 3The Hospital for Sick Children, Toronto, Ontario, Canada MSG 1X8; 4The Galton Laboratory, Biology Department, University College London, Wolfson House, London NW1 2HE, UK
Abstract
Genes involved in human male sex determination and spermatogenesis are likely to be located on the Y chromosome. In an effort to identify Y-linked, testis-expressed genes, a cDNA selection library was generated by selecting testis cDNA with Y-cosmid clones. Resultant clones containing repetitive or vector material were eliminated, and 79 of the remaining clones were sequenced. Nineteen cDNAs showed homology with the TTY2 gene, and indicated that TTY2 is part of a large gene family. Screening of a panel of Y-linked cosmids revealed that the TTY2 gene family includes at least 26 members organized in 14 subfamilies. Further investigation revealed that TTY2 genes are arranged in tandemly arrayed clusters on both arms of the Y chromosome, and each gene comprises a series of tandemly arranged repeats. RT-PCR studies for two of these genes revealed that they are expressed in adult and fetal testis, as well as in the adult kidney. None of the genes investigated in detail contain an open reading frame. We conclude that the TTY2 gene family is composed of multiple copies, some of which may function as noncoding RNA transcripts and some may be pseudogenes.
[The sequence data described in this paper for TTY2L12A and TTY2L2A have been submitted to the EMBL data library, under accession nos.AJ297963 and AJ297964.]
Footnotes
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↵5 Present address: MRC Prion Unit and Department of Neurogenetics, Imperial College School of Medicine at St. Mary's, London W2 1PG, UK, and GKT Medical and Dental School, Division of Medical and Molecular Genetics, Guy's Hospital, London SE1 3QD, UK.
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↵6 Corresponding author.
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E-MAIL yedwards{at}hgmp.mrc.ac.uk; FAX 44-207-387-3496.
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Article and publication are at http://www.genome.org/cgi/doi/10.1101/gr.175901.
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- Received December 15, 2000.
- Accepted March 22, 2001.
- Cold Spring Harbor Laboratory Press
