Describing the dynamics of processes consisting simultaneously of Poissonian and non-Poissonian kinetics

S. Eule and R. Friedrich
Phys. Rev. E 87, 032162 – Published 28 March 2013

Abstract

Dynamical processes exhibiting non-Poissonian kinetics with nonexponential waiting times are frequently encountered in nature. Examples are biochemical processes like gene transcription which are known to involve multiple intermediate steps. However, often a second process, obeying Poissonian statistics, affects the first one simultaneously, such as the degradation of mRNA in the above example. The aim of the present article is to provide a concise treatment of such random systems which are affected by regular and non-Poissonian kinetics at the same time. We derive the governing master equation and provide a controlled approximation scheme for this equation. The simplest approximation leads to generalized reaction rate equations. For a simple model of gene transcription we solve the resulting equation and show how the time evolution is influenced significantly by the type of waiting time distribution assumed for the non-Poissonian process.

  • Figure
  • Received 6 August 2012

DOI:https://doi.org/10.1103/PhysRevE.87.032162

©2013 American Physical Society

Authors & Affiliations

S. Eule1 and R. Friedrich2,*

  • 1Max Planck Institute for Dynamics and Self-Organization Am Faßberg 17, 37077 Göttingen, Germany
  • 2Institute for Theoretical Physics, University of Münster, Wilhelm-Klemm-Straße 9, 48149 Münster, Germany

  • *Deceased

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Vol. 87, Iss. 3 — March 2013

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