Direct measurements of the stabilization of single-stranded DNA under tension by single-stranded binding proteins

K. Hatch, C. Danilowicz, V. Coljee, and M. Prentiss
Phys. Rev. E 76, 021916 – Published 16 August 2007

Abstract

The unzipping and rezipping of a double-stranded DNA molecule is carried out in the presence of two single-stranded binding proteins T4 gp32 and E. Coli SSB protein to determine the effect of the proteins on the stability of single- and double-stranded DNA. The proteins do not have a significant effect on unzipping, indicating that the two proteins do not destabilize the double-stranded DNA; however, both proteins inhibit rezipping. At protein concentrations where the rezipping force response is saturated, E. Coli SSB protein reduces the rezipping force to 5.5±1.5pN, while T4 gp32 completely blocks rezipping on the time scale of the experiment.

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  • Received 18 April 2007

DOI:https://doi.org/10.1103/PhysRevE.76.021916

©2007 American Physical Society

Authors & Affiliations

K. Hatch, C. Danilowicz, V. Coljee, and M. Prentiss

  • Department of Physics, Harvard University, Cambridge, Massachusetts 02138, USA

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Vol. 76, Iss. 2 — August 2007

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