Extrinsic Noise and Heavy-Tailed Laws in Gene Expression

Lucy Ham, Rowan D. Brackston, and Michael P. H. Stumpf
Phys. Rev. Lett. 124, 108101 – Published 11 March 2020
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Abstract

Noise in gene expression is one of the hallmarks of life at the molecular scale. Here we derive analytical solutions to a set of models describing the molecular mechanisms underlying transcription of DNA into RNA. Our ansatz allows us to incorporate the effects of extrinsic noise—encompassing factors external to the transcription of the individual gene—and discuss the ramifications for heterogeneity in gene product abundance that has been widely observed in single cell data. Crucially, we are able to show that heavy-tailed distributions of RNA copy numbers cannot result from the intrinsic stochasticity in gene expression alone, but must instead reflect extrinsic sources of variability.

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  • Received 29 April 2019
  • Accepted 12 February 2020

DOI:https://doi.org/10.1103/PhysRevLett.124.108101

© 2020 American Physical Society

Physics Subject Headings (PhySH)

Physics of Living SystemsStatistical Physics & Thermodynamics

Authors & Affiliations

Lucy Ham1,*, Rowan D. Brackston2,†, and Michael P. H. Stumpf1,2,‡

  • 1School of BioSciences and School of Mathematics and Statistics, University of Melbourne, Parkville VIC 3010, Australia
  • 2Department Life Sciences, Imperial College London, SW7 2AZ, United Kingdom

  • *lucy.ham@unimelb.edu.au
  • r.brackston13@imperial.ac.uk
  • mstumpf@unimelb.edu.au

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Issue

Vol. 124, Iss. 10 — 13 March 2020

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