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Phenotyping Intensive Care Unit Patients Using Temporal Abstractions and Temporal Pattern Matching

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Published:02 October 2016Publication History

ABSTRACT

Adequate reutilization of routinely generated clinical data is a key component of what has been called a learning healthcare system, a system that is able to generate enough data that can be then analyzed to generate new insights into what works and what doesn't. However, the reutilization of electronic clinical data is not trivial since the quality of such data is usually low or unknown. Several tools have been developed to extract structured data from electronic health records (EHRs)--such as natural language processing--but, to this day, most researchers and quality experts rely on manual data extraction from EHRs. Here we assess the accuracy of ClincalTime, a temporal abstraction and query system designed easily identify patient cohorts based on patterns of clinical time intervals.

References

  1. D. Capurro, M. Barbe, C. Daza, J. Santa María, J. Trincado, and I. Gomez. Clinicaltime: Identification of patients with acute kidney injury using temporal abstractions and temporal pattern matching. AMIA Summits on Translational Science Proceedings, 2015:46, 2015.Google ScholarGoogle Scholar
  2. M. Saeed, M. Villarroel, A. T. Reisner, G. Clifford, L.-W. Lehman, G. Moody, T. Heldt, T. H. Kyaw, B. Moody, and R. G. Mark. Multiparameter intelligent monitoring in intensive care ii (MIMIC-II): a public-access intensive care unit database. Critical Care Medicine, 39(5):952, 2011.Google ScholarGoogle ScholarCross RefCross Ref

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  • Published in

    cover image ACM Conferences
    BCB '16: Proceedings of the 7th ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics
    October 2016
    675 pages
    ISBN:9781450342254
    DOI:10.1145/2975167

    Copyright © 2016 Owner/Author

    Permission to make digital or hard copies of part or all of this work for personal or classroom use is granted without fee provided that copies are not made or distributed for profit or commercial advantage and that copies bear this notice and the full citation on the first page. Copyrights for third-party components of this work must be honored. For all other uses, contact the Owner/Author.

    Publisher

    Association for Computing Machinery

    New York, NY, United States

    Publication History

    • Published: 2 October 2016

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    • poster
    • Research
    • Refereed limited

    Acceptance Rates

    Overall Acceptance Rate254of885submissions,29%

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