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Reproducible Quantitative PCR of Mitochondrial and Nuclear DNA Copy Number Using the LightCycler™

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Mitochondrial DNA

Part of the book series: Methods in Molecular Biology™ ((MIMB,volume 197))

Abstract

Recent developments in PCR fluorimetry have allowed for quick quantification

of target molecules. Before the invention of fluorimetric quantitative PCR, researchers who wanted to quantify the amount of a gene in a sample did so painstakingly by limiting dilution, competitive polymerase chain reaction (PCR), or other methods, including high-performance liquid chromatography (HPLC), solid phase assays, dot blots, or immunoassay (1).

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References

  1. Reischl, U. and Kochanowski, B. (1995) Quantitative PCR. A survey of the present technology. Mol. Biotechnol. 3, 55–71. 137

    Article  PubMed  CAS  Google Scholar 

  2. Wittwer, C. T., Herrmann, M. G., Moss, A. A., et al. (1997) Continuous fluorescence monitoring of rapid cycle DNA amplification. Biotechniques 22, 130–131, 134-138.

    PubMed  CAS  Google Scholar 

  3. Wittwer, C. T., Ririe, K. M., Andrew, R. V., et al. (1997) The LightCycler: a microvolume multisample fluorimeter with rapid temperature control. Biotechniques 22, 176–181.

    PubMed  CAS  Google Scholar 

  4. Idaho Technology, Inc. (1998) LightCycler User’s Guide. Idaho Technology, Idaho Falls, ID.

    Google Scholar 

  5. Tsuzuki, T., Nomiyama, H., Setoyama, C., et al. (1983) Presence of mitochondrial-DNA-like sequences in the human nuclear DNA. Gene 25, 223–229.

    Article  PubMed  CAS  Google Scholar 

  6. Parfait, B., Rustin, P., Munnich, A., et al. (1998) Co-amplification of nuclear pseudogenes and assessment of heteroplasmy of mitochondrial DNA mutations. Biochem. Biophys. Res. Commun. 247, 57–59.

    Article  PubMed  CAS  Google Scholar 

  7. Wallace, D. C., Stugard, C., Murdock, D., et al. (1997) Ancient mtDNA sequences in the human nuclear genome: a potential source of errors in identifying pathogenic mutations. Proc. Natl. Acad. Sci. USA 94, 14,900–14,905.

    Article  PubMed  CAS  Google Scholar 

  8. Hirano, M., Shtilbans, A., Mayeux, R., et al. (1997) Apparent mtDNA heteroplasmy inAlzheimer’s disease patients and in normals due to PCR amplification of nucleus-embedded mtDNA pseudogenes. Proc. Natl. Acad. Sci. USA 94, 14,894–14,899.

    Article  PubMed  CAS  Google Scholar 

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© 2002 Humana Press Inc.

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Wong, A., Cortopassi, G. (2002). Reproducible Quantitative PCR of Mitochondrial and Nuclear DNA Copy Number Using the LightCycler™. In: Copeland, W.C. (eds) Mitochondrial DNA. Methods in Molecular Biology™, vol 197. Humana Press. https://doi.org/10.1385/1-59259-284-8:129

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  • DOI: https://doi.org/10.1385/1-59259-284-8:129

  • Publisher Name: Humana Press

  • Print ISBN: 978-0-89603-972-8

  • Online ISBN: 978-1-59259-284-5

  • eBook Packages: Springer Protocols

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