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BY-NC-ND 3.0 license Open Access Published by De Gruyter (O) October 24, 2016

Crystal structure of 1,2,3-trimethyl-2,3-dihydro-1H-perimidine, C14H16N2

  • Zhong-Yan Li , Xian-You Yuan , Lin Yuan EMAIL logo and Min Zhang EMAIL logo

Abstract

C14H16N2, monoclinic, C2/c (no. 15), a = 32.300(3) Å, b = 7.2653(6) Å, c = 10.4316(10) Å, β = 102.133(5)°, V =2393.3(4) Å3, Z = 8, Rgt(F) = 0.0464, wRref(F2) = 0.1411, T = 296(2) K.

CCDC no.:: 1471471

The asymmetric unit of the title crystal structure is shown in the figure. Tables 1 and 2 contain details of the measurement method and a list of the atoms including atomic coordinates and displacement parameters.

Table 1:

Data collection and handling.

Crystal:Colourless blocks
Size:0.41 × 0.38 × 0.29 mm
Wavelength:Mo Kα radiation (0.71073 Å)
μ:0.7 cm−1
Diffractometer, scan mode:Bruker APEX-II, φ and ω
2θmax, completeness:50°, >99%
N(hkl)measured, N(hkl)unique, Rint:7687, 2111, 0.015
Criterion for Iobs, N(hkl)gt:Iobs > 2 σ(Iobs), 1593
N(param)refined:148
Programs:SHELX [10, 11], Bruker programs [12]
Table 2:

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2).

AtomxyzUiso*/Ueq
N10.09162(4)0.09647(16)0.68751(12)0.0530(4)
N20.16555(4)0.10822(17)0.70616(12)0.0566(4)
C10.12033(4)0.28185(17)0.53648(12)0.0431(4)
C50.07324(6)0.4657(2)0.37256(16)0.0701(5)
H50.06890.54750.30240.084*
C60.11503(5)0.40982(19)0.43173(14)0.0547(4)
C20.08428(4)0.21484(18)0.58082(13)0.0458(4)
C130.12998(5)−0.0142(2)0.70547(15)0.0557(4)
H130.1341−0.07100.79250.067*
C140.12678(6)−0.1691(2)0.60560(18)0.0780(6)
H14A0.1523−0.24090.62400.117*
H14B0.1230−0.11780.51910.117*
H14C0.1030−0.24620.61070.117*
C100.16197(4)0.22733(18)0.60095(14)0.0486(4)
C110.20685(6)0.0385(3)0.7683(2)0.0974(7)
H11A0.22530.13970.79990.146*
H11B0.2184−0.03090.70580.146*
H11C0.2042−0.03950.84050.146*
C120.05608(6)0.0140(3)0.73012(19)0.0796(6)
H12A0.0402−0.06000.66060.119*
H12B0.03820.10910.75250.119*
H12C0.0662−0.06190.80550.119*
C30.04454(5)0.2754(2)0.52104(16)0.0614(4)
H30.02090.23280.54970.074*
C40.03967(6)0.4008(2)0.41734(17)0.0721(5)
H40.01260.44080.37810.086*
C90.19636(5)0.3015(2)0.55970(18)0.0673(5)
H90.22360.26700.60090.081*
C80.19039(7)0.4281(3)0.4563(2)0.0787(6)
H80.21390.47730.43030.094*
C70.15122(7)0.4804(2)0.39331(18)0.0720(5)
H70.14810.56350.32410.086*

Source of material

Iodomethane (3.02 g, 0.021 mol) was added in one portion to a solution of 1,2-dimethyl-1H-perimidine (1.96 g, 0.01 mol) in dimethylformamide (15 mL) at 373 K. The mixture was heated for 6 h, giving a yellow precipitate. After cooling, the yellow solid was filtered and dried under vacuum to give 1,2,3-trimethyl-1H-perimidin-3-ium iodide (2.37 g, 70%), which was used in the next reaction without purification. Sodium borohydride (0.57 g, 0.015 mol) was added batch-wise to a solution of 1,2,3-trimethyl-1H-perimidin-3-ium iodide (3.38 g, 0.01 mol) in methanol (25 mL) under nitrogen atmosphere. The mixture was stirred at room temperature for 30 min, giving a white precipitate. After the completion of the reaction, the white solid was filtered, washed with water and dried under vacuum to yield the desired product (1.38 g, 65%). Colorless prisms of the product were obtained upon recrystallization from anhydrous ethanol.

Experimental details

All hydrogen atoms were identified in difference Fourier synthesis. The methyl groups were idealized and refined using rigid groups allowed to rotate about the N—C bond and C—C bond (AFIX 137 option of the SHELXL program [11]). The Uiso values of the hydrogen atoms of methyl groups were set to 1.5Ueq(C) and the Uiso values of all other hydrogen atons were set to 1.2Ueq(C).

Discussion

Multi-nuclear N-heterocyclic compounds like perimidines have drawn extensive examinations of many researchers for a long time, because they exhibit a diverse range of biological activities [1; 2; 3]. Perimidines also can be used as dyes and have a wide application in industrial field, and the famous product was reported as solvent black 3 [4]. There are several preparative methods for the synthesis of perimidine derivatives [5; 6; 7; 8; 9]. A new 1,2-dimethyl-1H-perimidine was synthesized and characterized by single-crystal X-ray diffraction.

All bond lengths and angles are in the expected ranges. The whole molecule shows almost mirror symmetry.

Award Identifier / Grant number: 2016

Funding statement: This work was financially supported by the Science and Technology Planning Project of Hunan Province (2015GK3037), the Scientific Research Fund of Hunan Provincial Education Department (14A058), the Construct Program of the Key Discipline in Hunan Province (2016).

Acknowledgements

This work was financially supported by the Science and Technology Planning Project of Hunan Province (2015GK3037), the Scientific Research Fund of Hunan Provincial Education Department (14A058), the Construct Program of the Key Discipline in Hunan Province (2016).

References

1 Bu, X.; Deady, L. W.; Finlay, G. J.; Baguley, B. C.; Denny, W. A.: Synthesis and cytotoxic activity of 7-Oxo-7H-dibenz[f,ij]isoquinoline and 7-oxo-7H-benzo[e]perimidine derivatives. J. Med. Chem. 44 (2001) 2004–2014.10.1021/jm010041lSearch in Google Scholar

2 Ye, J.; Sun, X. X.; Qiu, S. Y.; Hu, A. X.: Synthesis, crystal structure and fungicidal activity of N-(4-tert-buty)-5-(1,2,4-triazol-1-yl)thiazol-2-yl) propionamide. Chin. J. Struct. Chem. 3 (2014) 429–433.Search in Google Scholar

3 Fu, C. R.; Pei, J.; Ning, Y.; Liu, M.; Shan, P. C.; Liu, J.; Li, Y. Q.; Hu, F. Z.; Zhu, Y. Q.; Yang, H. Z.; Zou, X. M.: Synthesis and insecticidal activities of novel pyrazole oxime ether derivatives with different substituted pyridyl rings. Pest Manag. Sci. 70 (2013) 1207–1214.10.1002/ps.3672Search in Google Scholar

4 Hashim, J. A.; Kezhal, M. S.: Synthesis, characterization and biological activity of 2-Aryl-2,3-dihydro-1H-perimidine. Res. Pharm. Biotech. 5 (2014) 1–6.Search in Google Scholar

5 Vanden, E. J. J.; Delfosse, F.; Mayence, A.; Haverbeke, Y. V.: Old reagents, new results-aromatization of Hantzsch 1,4-dihydropyridines with manganese-dioxide and 2,3-dichloro-5,6-dicyano-1,4-benzoquinone. Tetrahedron 51 (1995) 5813–5818.10.1016/0040-4020(95)00318-3Search in Google Scholar

6 Hendrickson, J. B.; Hussoin, M. S.: Seeking the ideal dehydrating reagent. J. Org. Chem. 52 (1987) 4137–4139.10.1021/jo00227a041Search in Google Scholar

7 Deady, L. W.; Rodemann, T. J.: Synthesis of perimidine and fused perimidine derivatives from reaction of 1,8-naphthalenediamine with an iminoisocoumarin. Heterocycl. Chem. 35 (1998) 1417–1419.10.1002/jhet.5570350633Search in Google Scholar

8 Mueller-Westerhoff, U. T.; Vance, B.; Dong. I. Y.: The synthesis of dithiolene dyes with strong near-IR absorption. Tetrahedron 47 (1991) 909–932.10.1016/S0040-4020(01)80932-7Search in Google Scholar

9 Starshikov, M.; Pozharskii, F. T.: Synthesis of 2-(5-halogeno-2-furyl)-2,3-dihydroperimidines. Chem. Heterocycl. Compd. 9 (1973) 922–924.10.1007/BF00471584Search in Google Scholar

10 Sheldrick, G. M.: SHELXS-97: Program for the Solution of Crystal Structures. University of Göttingen, Germany, 1997.Search in Google Scholar

11 Sheldrick, G. M.: A short history of SHELX. Acta Crystallogr. A64 (2008) 112–122.10.1107/S0108767307043930Search in Google Scholar PubMed

12 Bruker. APEX2, SAINT and SADABS. Brucker AXS Inc., Madison, WI, USA, 2013.Search in Google Scholar

Received: 2016-4-24
Accepted: 2016-10-7
Published Online: 2016-10-24
Published in Print: 2017-1-1

©2016 Zhong-Yan Li et al., published by De Gruyter.

This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 3.0 License.

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